STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2E20_5332Nuclear pore complex Nup50. (318 aa)    
Predicted Functional Partners:
C2E20_9097
Nuclear pore complex NUP155.
   
 
 0.995
C2E20_3511
Nucleoporin NUP53.
   
 0.995
C2E20_1195
Nuclear pore protein.
   
 
 0.995
C2E20_5466
Rae1.
   
 0.993
C2E20_4329
Baculoviral IAP repeat-containing 6-like isoform X2 isoform B.
   
 
  0.990
C2E20_6007
Nucleoporin seh1-A; Belongs to the WD repeat SEC13 family.
   
 
 0.976
C2E20_6868
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
  0.917
g89
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.880
C2E20_2797
Ribulose bisphosphate carboxylase small chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO small chain family.
   
 
 0.847
C2E20_4908
Nuclear pore complex NUP160-like protein.
    
 0.837
Your Current Organism:
Micractinium conductrix
NCBI taxonomy Id: 554055
Other names: Chlorella sp. SAG 241.80, M. conductrix, Micractinium conductrix (K.Brandt) Proeschold & Darienko, 2011, Micractinium sp. TP-2008b
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