STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2E20_4997ATP-dependent zinc metalloprotease FTSH mitochondrial; Belongs to the AAA ATPase family. (693 aa)    
Predicted Functional Partners:
C2E20_7866
Uncharacterized protein.
    
   0.827
C2E20_1961
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B isoform A.
   
   0.827
C2E20_8956
Prohibitin.
   
 0.680
C2E20_8961
Band 7 isoform A.
   
 0.680
C2E20_9008
DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.
     
 0.667
C2E20_3739
Hypersensitive-induced response 1.
   
 0.601
C2E20_3367
Stomatin mitochondrial.
   
 0.601
C2E20_1085
Hypersensitive-induced response 3-like.
   
 0.601
g858
Carboxyl-terminal-processing peptidase chloroplastic.
   
 0.601
C2E20_4191
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
      
 0.585
Your Current Organism:
Micractinium conductrix
NCBI taxonomy Id: 554055
Other names: Chlorella sp. SAG 241.80, M. conductrix, Micractinium conductrix (K.Brandt) Proeschold & Darienko, 2011, Micractinium sp. TP-2008b
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.