STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2E20_4586DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1754 aa)    
Predicted Functional Partners:
C2E20_5974
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.944
C2E20_5238
DNA-directed RNA polymerase subunit 10.
    
 0.938
g829
DNA-directed RNA polymerases and III subunit RPABC2.
    
 0.938
C2E20_1242
Calcineurin-like phosphoesterase.
    
 0.920
C2E20_8343
DNA-directed RNA polymerase II subunit 4.
    
 0.910
C2E20_8080
DNA-directed RNA polymerase II subunit RPB7.
  
 
 0.901
C2E20_7576
Chromatin structure-remodeling complex SYD-like isoform X1.
   
 0.881
C2E20_1263
DNA-directed RNA polymerases IV and V subunit 3.
    
 0.880
g650
DNA-directed RNA polymerases IV and V subunit 9A; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
 0.880
g240
DNA-directed RNA polymerases II and V subunit 8A-like; Belongs to the eukaryotic RPB8 RNA polymerase subunit family.
    
 0.880
Your Current Organism:
Micractinium conductrix
NCBI taxonomy Id: 554055
Other names: Chlorella sp. SAG 241.80, M. conductrix, Micractinium conductrix (K.Brandt) Proeschold & Darienko, 2011, Micractinium sp. TP-2008b
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