STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2E20_3842P-loop containing nucleoside triphosphate hydrolase. (1578 aa)    
Predicted Functional Partners:
C2E20_5445
Regulator of nonsense transcripts UPF2.
   
 0.917
C2E20_2431
Telomerase-binding EST1A.
    
 0.867
C2E20_1557
Nuclear cap-binding subunit 1.
    
 0.781
C2E20_8054
Nuclear cap-binding protein subunit 2.
    
 0.777
C2E20_2325
RNA-binding 8A.
    
 0.744
C2E20_7926
Hydroxylamine reductase.
    
 0.735
C2E20_4183
Hydroxylamine reductase.
    
 0.735
C2E20_2906
Hydroxylamine reductase isoform A.
    
 0.735
g220
Elongation factor.
    
 0.718
C2E20_1668
Eukaryotic peptide chain release factor subunit 1-3.
   
 0.660
Your Current Organism:
Micractinium conductrix
NCBI taxonomy Id: 554055
Other names: Chlorella sp. SAG 241.80, M. conductrix, Micractinium conductrix (K.Brandt) Proeschold & Darienko, 2011, Micractinium sp. TP-2008b
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