Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C2E20_2367 | C2E20_2814 | A0A2P6VKX7 | A0A2P6VIS3 | Thioredoxin 4A. | 116 kDa U5 small nuclear ribonucleo component-like. | 0.999 |
C2E20_2367 | C2E20_2991 | A0A2P6VKX7 | A0A2P6VIC6 | Thioredoxin 4A. | U4 U6 small nuclear ribonucleo Prp31-like. | 0.981 |
C2E20_2367 | C2E20_3338 | A0A2P6VKX7 | A0A2P6VHJ4 | Thioredoxin 4A. | Pre-mRNA-processing-splicing factor 8. | 0.999 |
C2E20_2367 | C2E20_5170 | A0A2P6VKX7 | A0A2P6VBP3 | Thioredoxin 4A. | STABILIZED1-like. | 0.999 |
C2E20_2367 | C2E20_7910 | A0A2P6VKX7 | A0A2P6V368 | Thioredoxin 4A. | U4 tri-snRNP-associated 1. | 0.982 |
C2E20_2367 | C2E20_8043 | A0A2P6VKX7 | A0A2P6V2M6 | Thioredoxin 4A. | U6 snRNA-associated Sm LSm2. | 0.923 |
C2E20_2367 | C2E20_8731 | A0A2P6VKX7 | A0A2P6V0M1 | Thioredoxin 4A. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.966 |
C2E20_2367 | LSM4 | A0A2P6VKX7 | A0A2P6V9J0 | Thioredoxin 4A. | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.931 |
C2E20_2367 | LSM8 | A0A2P6VKX7 | A0A2P6V2W4 | Thioredoxin 4A. | U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.960 |
C2E20_2367 | g134 | A0A2P6VKX7 | A0A2P6VQG3 | Thioredoxin 4A. | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | 0.918 |
C2E20_2814 | C2E20_2367 | A0A2P6VIS3 | A0A2P6VKX7 | 116 kDa U5 small nuclear ribonucleo component-like. | Thioredoxin 4A. | 0.999 |
C2E20_2814 | C2E20_2991 | A0A2P6VIS3 | A0A2P6VIC6 | 116 kDa U5 small nuclear ribonucleo component-like. | U4 U6 small nuclear ribonucleo Prp31-like. | 0.979 |
C2E20_2814 | C2E20_3338 | A0A2P6VIS3 | A0A2P6VHJ4 | 116 kDa U5 small nuclear ribonucleo component-like. | Pre-mRNA-processing-splicing factor 8. | 0.999 |
C2E20_2814 | C2E20_5170 | A0A2P6VIS3 | A0A2P6VBP3 | 116 kDa U5 small nuclear ribonucleo component-like. | STABILIZED1-like. | 0.999 |
C2E20_2814 | C2E20_7910 | A0A2P6VIS3 | A0A2P6V368 | 116 kDa U5 small nuclear ribonucleo component-like. | U4 tri-snRNP-associated 1. | 0.976 |
C2E20_2814 | C2E20_8043 | A0A2P6VIS3 | A0A2P6V2M6 | 116 kDa U5 small nuclear ribonucleo component-like. | U6 snRNA-associated Sm LSm2. | 0.940 |
C2E20_2814 | C2E20_8731 | A0A2P6VIS3 | A0A2P6V0M1 | 116 kDa U5 small nuclear ribonucleo component-like. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.989 |
C2E20_2814 | LSM4 | A0A2P6VIS3 | A0A2P6V9J0 | 116 kDa U5 small nuclear ribonucleo component-like. | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.932 |
C2E20_2814 | LSM8 | A0A2P6VIS3 | A0A2P6V2W4 | 116 kDa U5 small nuclear ribonucleo component-like. | U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.958 |
C2E20_2814 | g134 | A0A2P6VIS3 | A0A2P6VQG3 | 116 kDa U5 small nuclear ribonucleo component-like. | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | 0.974 |
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