STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2E20_3218Argininosuccinate synthase. (447 aa)    
Predicted Functional Partners:
C2E20_5994
Argininosuccinate lyase.
 
 
 0.999
C2E20_4340
Ornithine chloroplastic; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
  
 
 0.998
C2E20_8623
Carbamoyl-phosphate synthase large chloroplastic-like.
 
 
 0.995
C2E20_5685
N-acetyl-gamma-glutamyl-phosphate reductase.
  
  
 0.995
C2E20_8551
Aspartate carbamoyltransferase chloroplastic; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
  
 
 0.991
PURA
Adenylosuccinate synthetase, chloroplastic; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP.
  
 
 0.985
C2E20_7610
Carbamoyl-phosphate synthase S chain; Belongs to the peroxidase family.
  
 
 0.982
C2E20_4350
Asparagine synthase.
   
 0.981
C2E20_4417
Aspartokinase; Belongs to the aspartokinase family.
  
 
 0.970
C2E20_4154
Aspartate aminotransferase.
   
 
 0.970
Your Current Organism:
Micractinium conductrix
NCBI taxonomy Id: 554055
Other names: Chlorella sp. SAG 241.80, M. conductrix, Micractinium conductrix (K.Brandt) Proeschold & Darienko, 2011, Micractinium sp. TP-2008b
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