STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2E20_1348L domain. (889 aa)    
Predicted Functional Partners:
C2E20_3333
RING-box 1.
    
 0.597
C2E20_4724
SKP1 1B; Belongs to the SKP1 family.
   
 0.564
C2E20_3293
SKP1 21 isoform X1.
   
 0.564
C2E20_6288
Cullin 3; Belongs to the cullin family.
    
 0.546
g24
Cullin-1-like; Belongs to the cullin family.
    
 0.546
C2E20_3595
Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family.
    
 0.489
C2E20_8946
Bi-major isoform.
    
 0.429
C2E20_5188
Polyubiquitin-B.
    
 0.429
C2E20_4131
SDE2-like protein.
    
 0.429
C2E20_1319
Polyubiquitin; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
 0.429
Your Current Organism:
Micractinium conductrix
NCBI taxonomy Id: 554055
Other names: Chlorella sp. SAG 241.80, M. conductrix, Micractinium conductrix (K.Brandt) Proeschold & Darienko, 2011, Micractinium sp. TP-2008b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.