STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2E20_1294Kelch domain-containing. (578 aa)    
Predicted Functional Partners:
C2E20_2777
Fanconi anemia group M isoform X1.
   
 0.997
C2E20_2738
Deoxyuridine 5-triphosphate nucleotidohydrolase.
   
 0.721
C2E20_4988
PHP domain.
    
 0.516
g456
Ribonuclease P subunit p29.
   
 0.511
C2E20_8119
E3 ubiquitin-ligase FANCL.
    
  0.510
C2E20_1530
DNA repair endonuclease UVH1.
   
 0.506
C2E20_7754
DNA excision repair ERCC-1.
    
 0.493
C2E20_6101
Formate acetyltransferase.
    
 0.482
g879
Histone acetyltransferase HAC1-like.
    
 0.482
C2E20_7184
KRAB-A domain-containing 2-like.
    
 0.481
Your Current Organism:
Micractinium conductrix
NCBI taxonomy Id: 554055
Other names: Chlorella sp. SAG 241.80, M. conductrix, Micractinium conductrix (K.Brandt) Proeschold & Darienko, 2011, Micractinium sp. TP-2008b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.