STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
g654DAMAGED DNA-BINDING 2. (1283 aa)    
Predicted Functional Partners:
C2E20_7919
DNA damage-binding 1.
    
 0.947
C2E20_2157
Cullin 4; Belongs to the cullin family.
    
 0.829
C2E20_3117
DNA excision repair ERCC-8-like.
    
 0.816
C2E20_6911
DNA repair complementing XP-C cells-like protein.
   
 0.810
C2E20_3333
RING-box 1.
    
 0.788
g187
COP9 signalosome complex subunit 5b-like.
    
 0.758
C2E20_2728
Ubiquitin specific peptidase 24 isoform B; Belongs to the peptidase C19 family.
    
 0.754
C2E20_6984
COP9 signalosome complex subunit 4.
    
  0.737
C2E20_3575
Ubiquitin receptor RAD23b-like.
   
 0.712
C2E20_4415
Exonuclease 1.
   
 0.700
Your Current Organism:
Micractinium conductrix
NCBI taxonomy Id: 554055
Other names: Chlorella sp. SAG 241.80, M. conductrix, Micractinium conductrix (K.Brandt) Proeschold & Darienko, 2011, Micractinium sp. TP-2008b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.