STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E1ZQD5_CHLVAHelicase C-terminal domain-containing protein. (1029 aa)    
Predicted Functional Partners:
E1ZBB9_CHLVA
Uncharacterized protein.
   
 0.999
E1Z5J2_CHLVA
BING4CT domain-containing protein.
   
 0.990
E1ZG78_CHLVA
CBF domain-containing protein.
   
 0.988
E1ZJ46_CHLVA
KH domain-containing protein.
   
 0.987
E1Z9K4_CHLVA
WD_REPEATS_REGION domain-containing protein.
   
 
 0.981
E1ZIC2_CHLVA
Uncharacterized protein.
   
 
 0.979
E1Z9Q2_CHLVA
DRIM domain-containing protein.
   
 0.977
E1Z913_CHLVA
Uncharacterized protein.
   
 
 0.975
E1ZEA4_CHLVA
Uncharacterized protein.
   
 0.973
E1ZJV3_CHLVA
WD_REPEATS_REGION domain-containing protein.
   
 0.973
Your Current Organism:
Chlorella variabilis
NCBI taxonomy Id: 554065
Other names: C. variabilis, Chlorella sp. 211-6, Chlorella sp. Bnd1-ZK, Chlorella sp. Dd1-ZK, Chlorella sp. F36-ZK, Chlorella sp. KM2-ZK, Chlorella sp. NC64A, Chlorella sp. OK1-ZK, Chlorella sp. SAG 211-6, Chlorella sp. So13-ZK, Chlorella sp. Syngen 2-3, SAG 211-6
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