OMH22918.1 protein (Tersicoccus phoenicis) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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[Homology]

Score

OMH22918.1

Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (957 aa)

Predicted Functional Partners:

OMH22917.1

0.877

OMH22920.1

0.875

OMH24909.1

0.807

OMH24696.1

0.785

OMH22919.1

0.648

Your Current Organism:

Tersicoccus phoenicis

NCBI taxonomy Id: 554083
Other names: Arthrobacter sp. 1P05MA, Arthrobacter sp. KO_PS43, DSM 30849, NRRL B-59547, T. phoenicis, Tersicoccus phoenicis Vaishampayan et al. 2013, strain 1P05MA

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OMH22917.1	OMH22918.1	BKD30_15210	BKD30_15215	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.877
OMH22917.1	OMH22920.1	BKD30_15210	BKD30_15225	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.828
OMH22917.1	OMH24909.1	BKD30_15210	BKD30_07015	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.740
OMH22918.1	OMH22917.1	BKD30_15215	BKD30_15210	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.877
OMH22918.1	OMH22919.1	BKD30_15215	BKD30_15220	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.648
OMH22918.1	OMH22920.1	BKD30_15215	BKD30_15225	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.875
OMH22918.1	OMH24696.1	BKD30_15215	BKD30_07980	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Type III restriction endonuclease subunit R; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.785
OMH22918.1	OMH24909.1	BKD30_15215	BKD30_07015	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.807
OMH22919.1	OMH22918.1	BKD30_15220	BKD30_15215	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.648
OMH22919.1	OMH22920.1	BKD30_15220	BKD30_15225	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.482
OMH22920.1	OMH22917.1	BKD30_15225	BKD30_15210	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.828
OMH22920.1	OMH22918.1	BKD30_15225	BKD30_15215	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.875
OMH22920.1	OMH22919.1	BKD30_15225	BKD30_15220	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.482
OMH22920.1	OMH24696.1	BKD30_15225	BKD30_07980	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Type III restriction endonuclease subunit R; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.781
OMH24696.1	OMH22918.1	BKD30_07980	BKD30_15215	Type III restriction endonuclease subunit R; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.785
OMH24696.1	OMH22920.1	BKD30_07980	BKD30_15225	Type III restriction endonuclease subunit R; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.781
OMH24696.1	OMH24909.1	BKD30_07980	BKD30_07015	Type III restriction endonuclease subunit R; Derived by automated computational analysis using gene prediction method: Protein Homology.	AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.781
OMH24909.1	OMH22917.1	BKD30_07015	BKD30_15210	AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.740
OMH24909.1	OMH22918.1	BKD30_07015	BKD30_15215	AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.807
OMH24909.1	OMH24696.1	BKD30_07015	BKD30_07980	AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Type III restriction endonuclease subunit R; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.781

Network Stats

number of nodes:

11

number of edges:

47

average node degree:

8.55

avg. local clustering coefficient:

0.968

expected number of edges:

13

PPI enrichment p-value:

1.13e-13

your network has significantly more interactions
than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
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Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0006470

Protein dephosphorylation

3 of 24

2.07

1.09

0.0087

Molecular Function (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0004725

Protein tyrosine phosphatase activity

3 of 13

2.34

1.68

0.00070

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:14065

Mixed, incl. Protein autoprocessing, and Cell surface receptor signaling pathway

3 of 11

2.41

1.77

0.00050

CL:2835

Protein phosphatase, and Negative regulation of MAPK cascade

2 of 6

2.5

1.1

0.0098

CL:14067

Cell surface receptor signaling pathway, and FAS1 domain

2 of 5

2.58

1.1

0.0098

Annotated Keywords (UniProt)

keyword

description

count in network

strength

signal

false discovery rate

KW-0904

Protein phosphatase

2 of 5

2.58

1.27

0.0048

Protein Domains and Features (InterPro)

domain

description

count in network

strength

signal

false discovery rate

IPR003595

Protein-tyrosine phosphatase, catalytic

2 of 3

2.8

1.01

0.0152

IPR000242

Tyrosine-specific protein phosphatase, PTPase domain

2 of 2

2.97

1.01

0.0152

IPR016130

Protein-tyrosine phosphatase, active site

2 of 10

2.28

0.73

0.0463

IPR000387

Tyrosine-specific protein phosphatases domain

2 of 9

2.32

0.73

0.0463

Protein Domains (SMART)

domain

description

count in network

strength

signal

false discovery rate

SM00194

Protein tyrosine phosphatase, catalytic domain

2 of 2

2.97

1.52

0.0018

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