STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OMH22935.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (489 aa)    
Predicted Functional Partners:
OMH22943.1
Conjugal transfer protein TrbL; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.976
OMH22934.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.940
OMH22940.1
ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.904
OMH22932.1
Metalloendopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.876
OMH22930.1
Chromosome partitioning protein ParB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.849
OMH25479.1
Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.848
OMH22926.1
Serine/arginine repetitive matrix protein 2; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.820
OMH22927.1
Excisionase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.820
OMH22942.1
DNA primase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.819
OMH25477.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.798
Your Current Organism:
Tersicoccus phoenicis
NCBI taxonomy Id: 554083
Other names: Arthrobacter sp. 1P05MA, Arthrobacter sp. KO_PS43, DSM 30849, NRRL B-59547, T. phoenicis, Tersicoccus phoenicis Vaishampayan et al. 2013, strain 1P05MA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.