Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MCYG_00703 | MCYG_04795 | C5FDL9 | C5FQ23 | Ribosome biogenesis protein SSF1. | 60S ribosomal protein L7. | 0.842 |
MCYG_00703 | MCYG_08115 | C5FDL9 | C5FZJ3 | Ribosome biogenesis protein SSF1. | WD repeat protein. | 0.511 |
MCYG_00703 | STS1 | C5FDL9 | C5FF22 | Ribosome biogenesis protein SSF1. | Tethering factor for nuclear proteasome STS1; Involved in ubiquitin-mediated protein degradation. Regulatory factor in the ubiquitin/proteasome pathway that controls the turnover of proteasome substrates. Targets proteasomes to the nucleus and facilitates the degradation of nuclear proteins (By similarity). | 0.651 |
MCYG_00796 | STS1 | C5FDD4 | C5FF22 | Oligoribonuclease. | Tethering factor for nuclear proteasome STS1; Involved in ubiquitin-mediated protein degradation. Regulatory factor in the ubiquitin/proteasome pathway that controls the turnover of proteasome substrates. Targets proteasomes to the nucleus and facilitates the degradation of nuclear proteins (By similarity). | 0.682 |
MCYG_02404 | MCYG_06921 | C5FFQ0 | C5FW18 | Proliferating cell nuclear antigen. | 60S ribosomal protein L2. | 0.477 |
MCYG_02404 | STS1 | C5FFQ0 | C5FF22 | Proliferating cell nuclear antigen. | Tethering factor for nuclear proteasome STS1; Involved in ubiquitin-mediated protein degradation. Regulatory factor in the ubiquitin/proteasome pathway that controls the turnover of proteasome substrates. Targets proteasomes to the nucleus and facilitates the degradation of nuclear proteins (By similarity). | 0.847 |
MCYG_03391 | MCYG_04795 | C5FLK0 | C5FQ23 | CLP1_P domain-containing protein. | 60S ribosomal protein L7. | 0.729 |
MCYG_03391 | MCYG_07027 | C5FLK0 | C5FWC4 | CLP1_P domain-containing protein. | Pre-rRNA-processing protein ipi1. | 0.930 |
MCYG_03391 | MCYG_08115 | C5FLK0 | C5FZJ3 | CLP1_P domain-containing protein. | WD repeat protein. | 0.981 |
MCYG_03391 | STS1 | C5FLK0 | C5FF22 | CLP1_P domain-containing protein. | Tethering factor for nuclear proteasome STS1; Involved in ubiquitin-mediated protein degradation. Regulatory factor in the ubiquitin/proteasome pathway that controls the turnover of proteasome substrates. Targets proteasomes to the nucleus and facilitates the degradation of nuclear proteins (By similarity). | 0.694 |
MCYG_03464 | MCYG_04795 | C5FLS3 | C5FQ23 | Polyadenylate-binding protein. | 60S ribosomal protein L7. | 0.817 |
MCYG_03464 | MCYG_06583 | C5FLS3 | C5FV30 | Polyadenylate-binding protein. | PAB-dependent poly(A)-specific ribonuclease subunit PAN3. | 0.975 |
MCYG_03464 | MCYG_06921 | C5FLS3 | C5FW18 | Polyadenylate-binding protein. | 60S ribosomal protein L2. | 0.751 |
MCYG_03464 | STS1 | C5FLS3 | C5FF22 | Polyadenylate-binding protein. | Tethering factor for nuclear proteasome STS1; Involved in ubiquitin-mediated protein degradation. Regulatory factor in the ubiquitin/proteasome pathway that controls the turnover of proteasome substrates. Targets proteasomes to the nucleus and facilitates the degradation of nuclear proteins (By similarity). | 0.758 |
MCYG_04795 | MCYG_00703 | C5FQ23 | C5FDL9 | 60S ribosomal protein L7. | Ribosome biogenesis protein SSF1. | 0.842 |
MCYG_04795 | MCYG_03391 | C5FQ23 | C5FLK0 | 60S ribosomal protein L7. | CLP1_P domain-containing protein. | 0.729 |
MCYG_04795 | MCYG_03464 | C5FQ23 | C5FLS3 | 60S ribosomal protein L7. | Polyadenylate-binding protein. | 0.817 |
MCYG_04795 | MCYG_06921 | C5FQ23 | C5FW18 | 60S ribosomal protein L7. | 60S ribosomal protein L2. | 0.999 |
MCYG_04795 | MCYG_07027 | C5FQ23 | C5FWC4 | 60S ribosomal protein L7. | Pre-rRNA-processing protein ipi1. | 0.877 |
MCYG_04795 | MCYG_08115 | C5FQ23 | C5FZJ3 | 60S ribosomal protein L7. | WD repeat protein. | 0.922 |
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