STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCYG_02240Ribosomal RNA-processing protein 8; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of adenine in helix 25.1 in 25S rRNA. Required both for ribosomal 40S and 60S subunits biogenesis. Required for efficient pre-rRNA cleavage at site A2. Belongs to the methyltransferase superfamily. RRP8 family. (507 aa)    
Predicted Functional Partners:
MCYG_00039
Importin beta-1 subunit.
    
   0.919
MCYG_03816
Importin subunit alpha; Belongs to the importin alpha family.
    
   0.919
MCYG_07572
Ribosome biogenesis protein RPF2.
   
   0.910
MCYG_01328
Nucleolar protein 4.
   
   0.904
MCYG_01275
Ribosomal biogenesis protein Gar2.
   
   0.903
MCYG_03799
Puf family RNA-binding protein.
   
 
 0.898
MCYG_02237
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
   0.881
MCYG_05122
Ebp2p.
   
   0.880
MCYG_00027
Nucleolar Complex 2 protein.
   
 
 0.872
MCYG_00426
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
   
   0.869
Your Current Organism:
Microsporum canis
NCBI taxonomy Id: 554155
Other names: Arthroderma otae CBS 113480, M. canis CBS 113480, Microsporum canis CBS 113480, Microsporum canis CBS113480
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.