Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MCYG_00426 | MCYG_00692 | C5FCK4 | C5FDK8 | U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | U3 small nucleolar RNA associated protein. | 0.999 |
MCYG_00426 | MCYG_00974 | C5FCK4 | C5FE52 | U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | 40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. | 0.997 |
MCYG_00426 | MCYG_02772 | C5FCK4 | C5FGR8 | U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | WD40 repeat protein. | 0.610 |
MCYG_00426 | MCYG_06420 | C5FCK4 | C5FUL7 | U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | 40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. | 0.997 |
MCYG_00426 | MCYG_08615 | C5FCK4 | C5G0Z3 | U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | U3 snoRNP protein Utp20. | 0.998 |
MCYG_00692 | MCYG_00426 | C5FDK8 | C5FCK4 | U3 small nucleolar RNA associated protein. | U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | 0.999 |
MCYG_00692 | MCYG_00974 | C5FDK8 | C5FE52 | U3 small nucleolar RNA associated protein. | 40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. | 0.997 |
MCYG_00692 | MCYG_02772 | C5FDK8 | C5FGR8 | U3 small nucleolar RNA associated protein. | WD40 repeat protein. | 0.610 |
MCYG_00692 | MCYG_06420 | C5FDK8 | C5FUL7 | U3 small nucleolar RNA associated protein. | 40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. | 0.997 |
MCYG_00692 | MCYG_08615 | C5FDK8 | C5G0Z3 | U3 small nucleolar RNA associated protein. | U3 snoRNP protein Utp20. | 0.998 |
MCYG_00974 | MCYG_00426 | C5FE52 | C5FCK4 | 40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. | U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | 0.997 |
MCYG_00974 | MCYG_00692 | C5FE52 | C5FDK8 | 40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. | U3 small nucleolar RNA associated protein. | 0.997 |
MCYG_00974 | MCYG_02772 | C5FE52 | C5FGR8 | 40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. | WD40 repeat protein. | 0.610 |
MCYG_00974 | MCYG_06420 | C5FE52 | C5FUL7 | 40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. | 40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. | 0.999 |
MCYG_00974 | MCYG_08615 | C5FE52 | C5G0Z3 | 40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. | U3 snoRNP protein Utp20. | 0.997 |
MCYG_01668 | MCYG_02772 | C5FHD0 | C5FGR8 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | WD40 repeat protein. | 0.782 |
MCYG_01668 | MCYG_03707 | C5FHD0 | C5FJM7 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Glycerophosphodiesterase GDE1. | 0.476 |
MCYG_01668 | MCYG_04628 | C5FHD0 | C5FNV6 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Nitrate reductase. | 0.978 |
MCYG_01668 | MCYG_06556 | C5FHD0 | C5FV03 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Glycerophosphodiesterase GDE1. | 0.476 |
MCYG_02772 | MCYG_00426 | C5FGR8 | C5FCK4 | WD40 repeat protein. | U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | 0.610 |
page 1 of 3