Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MCYG_01596 | MCYG_01668 | C5FH58 | C5FHD0 | Extensin. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.794 |
MCYG_01596 | MCYG_02200 | C5FH58 | C5FJ51 | Extensin. | Beta-hexosaminidase. | 0.583 |
MCYG_01596 | MCYG_03466 | C5FH58 | C5FLS5 | Extensin. | NAD dehydrogenase. | 0.595 |
MCYG_01596 | MCYG_04195 | C5FH58 | C5FP60 | Extensin. | NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. | 0.729 |
MCYG_01596 | MCYG_04628 | C5FH58 | C5FNV6 | Extensin. | Nitrate reductase. | 0.794 |
MCYG_01596 | MCYG_04689 | C5FH58 | C5FP17 | Extensin. | NADH-ubiquinone oxidoreductase 24 kDa subunit. | 0.582 |
MCYG_01596 | MCYG_04861 | C5FH58 | C5FQ89 | Extensin. | Malic enzyme. | 0.591 |
MCYG_01596 | MCYG_05459 | C5FH58 | C5FRY7 | Extensin. | Phosphoribosylformylglycinamidine cyclo-ligase. | 0.609 |
MCYG_01596 | MCYG_06137 | C5FH58 | C5FWR1 | Extensin. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.550 |
MCYG_01596 | MCYG_07277 | C5FH58 | C5FY60 | Extensin. | Uncharacterized protein. | 0.550 |
MCYG_01668 | MCYG_01596 | C5FHD0 | C5FH58 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Extensin. | 0.794 |
MCYG_01668 | MCYG_04195 | C5FHD0 | C5FP60 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. | 0.761 |
MCYG_01668 | MCYG_04628 | C5FHD0 | C5FNV6 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Nitrate reductase. | 0.978 |
MCYG_01668 | MCYG_04689 | C5FHD0 | C5FP17 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | NADH-ubiquinone oxidoreductase 24 kDa subunit. | 0.456 |
MCYG_01668 | MCYG_04861 | C5FHD0 | C5FQ89 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Malic enzyme. | 0.604 |
MCYG_01668 | MCYG_06137 | C5FHD0 | C5FWR1 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.770 |
MCYG_01668 | MCYG_07277 | C5FHD0 | C5FY60 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Uncharacterized protein. | 0.770 |
MCYG_02200 | MCYG_01596 | C5FJ51 | C5FH58 | Beta-hexosaminidase. | Extensin. | 0.583 |
MCYG_03466 | MCYG_01596 | C5FLS5 | C5FH58 | NAD dehydrogenase. | Extensin. | 0.595 |
MCYG_03466 | MCYG_04689 | C5FLS5 | C5FP17 | NAD dehydrogenase. | NADH-ubiquinone oxidoreductase 24 kDa subunit. | 0.710 |
page 1 of 3