Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MCYG_01275 | MCYG_01663 | C5FER3 | C5FHC5 | Ribosomal biogenesis protein Gar2. | U3 small nucleolar ribonucleoprotein IMP4. | 0.919 |
MCYG_01275 | MCYG_01751 | C5FER3 | C5FHV2 | Ribosomal biogenesis protein Gar2. | Uncharacterized protein. | 0.841 |
MCYG_01275 | MCYG_02924 | C5FER3 | C5FK83 | Ribosomal biogenesis protein Gar2. | Protein BCP1; Involved in nuclear export, actin cytoskeleton organization and vesicular transport; Belongs to the BCP1 family. | 0.823 |
MCYG_01275 | MCYG_03974 | C5FER3 | C5FMQ2 | Ribosomal biogenesis protein Gar2. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.990 |
MCYG_01275 | MCYG_05122 | C5FER3 | C5FR00 | Ribosomal biogenesis protein Gar2. | Ebp2p. | 0.994 |
MCYG_01275 | MCYG_05643 | C5FER3 | C5FSH1 | Ribosomal biogenesis protein Gar2. | 60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family. | 0.892 |
MCYG_01275 | MCYG_06808 | C5FER3 | C5FVQ5 | Ribosomal biogenesis protein Gar2. | Ribosome biogenesis protein BRX1. | 0.984 |
MCYG_01275 | MCYG_06809 | C5FER3 | C5FVQ6 | Ribosomal biogenesis protein Gar2. | F-box domain-containing protein. | 0.984 |
MCYG_01275 | MCYG_07572 | C5FER3 | C5FZ05 | Ribosomal biogenesis protein Gar2. | Ribosome biogenesis protein RPF2. | 0.994 |
MCYG_01275 | YTM1 | C5FER3 | C5FXV3 | Ribosomal biogenesis protein Gar2. | Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.993 |
MCYG_01663 | MCYG_01275 | C5FHC5 | C5FER3 | U3 small nucleolar ribonucleoprotein IMP4. | Ribosomal biogenesis protein Gar2. | 0.919 |
MCYG_01663 | MCYG_02924 | C5FHC5 | C5FK83 | U3 small nucleolar ribonucleoprotein IMP4. | Protein BCP1; Involved in nuclear export, actin cytoskeleton organization and vesicular transport; Belongs to the BCP1 family. | 0.746 |
MCYG_01663 | MCYG_03974 | C5FHC5 | C5FMQ2 | U3 small nucleolar ribonucleoprotein IMP4. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.888 |
MCYG_01663 | MCYG_05122 | C5FHC5 | C5FR00 | U3 small nucleolar ribonucleoprotein IMP4. | Ebp2p. | 0.903 |
MCYG_01663 | MCYG_06808 | C5FHC5 | C5FVQ5 | U3 small nucleolar ribonucleoprotein IMP4. | Ribosome biogenesis protein BRX1. | 0.877 |
MCYG_01663 | MCYG_06809 | C5FHC5 | C5FVQ6 | U3 small nucleolar ribonucleoprotein IMP4. | F-box domain-containing protein. | 0.877 |
MCYG_01663 | MCYG_07572 | C5FHC5 | C5FZ05 | U3 small nucleolar ribonucleoprotein IMP4. | Ribosome biogenesis protein RPF2. | 0.957 |
MCYG_01663 | YTM1 | C5FHC5 | C5FXV3 | U3 small nucleolar ribonucleoprotein IMP4. | Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.898 |
MCYG_01751 | MCYG_01275 | C5FHV2 | C5FER3 | Uncharacterized protein. | Ribosomal biogenesis protein Gar2. | 0.841 |
MCYG_01751 | MCYG_02924 | C5FHV2 | C5FK83 | Uncharacterized protein. | Protein BCP1; Involved in nuclear export, actin cytoskeleton organization and vesicular transport; Belongs to the BCP1 family. | 0.841 |
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