Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MCYG_00199 | MCYG_00911 | C5FBX7 | C5FDY9 | 40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. | Phenylalanyl-tRNA synthetase. | 0.749 |
MCYG_00199 | MCYG_01069 | C5FBX7 | C5FEE7 | 40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. | G-protein complex beta subunit CpcB. | 0.998 |
MCYG_00199 | MCYG_04198 | C5FBX7 | C5FP63 | 40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. | Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. | 0.901 |
MCYG_00199 | MCYG_05157 | C5FBX7 | C5FR35 | 40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. | S1-like domain-containing protein. | 0.676 |
MCYG_00199 | MCYG_06747 | C5FBX7 | C5FVJ4 | 40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. | 20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. | 0.997 |
MCYG_00199 | MCYG_07093 | C5FBX7 | C5FWJ0 | 40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. | 40S ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family. | 0.999 |
MCYG_00199 | MCYG_07169 | C5FBX7 | C5FXV2 | 40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. | 40S ribosomal protein S13; Belongs to the universal ribosomal protein uS13 family. | 0.995 |
MCYG_00199 | MCYG_07702 | C5FBX7 | C5FX43 | 40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. | 40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. | 0.999 |
MCYG_00199 | MCYG_08036 | C5FBX7 | C5FZB4 | 40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. | 40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. | 0.999 |
MCYG_00199 | MCYG_08519 | C5FBX7 | C5G0P7 | 40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. | Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. | 0.999 |
MCYG_00911 | MCYG_00199 | C5FDY9 | C5FBX7 | Phenylalanyl-tRNA synthetase. | 40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. | 0.749 |
MCYG_00911 | MCYG_01069 | C5FDY9 | C5FEE7 | Phenylalanyl-tRNA synthetase. | G-protein complex beta subunit CpcB. | 0.581 |
MCYG_00911 | MCYG_04198 | C5FDY9 | C5FP63 | Phenylalanyl-tRNA synthetase. | Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. | 0.737 |
MCYG_00911 | MCYG_05157 | C5FDY9 | C5FR35 | Phenylalanyl-tRNA synthetase. | S1-like domain-containing protein. | 0.648 |
MCYG_00911 | MCYG_06747 | C5FDY9 | C5FVJ4 | Phenylalanyl-tRNA synthetase. | 20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. | 0.567 |
MCYG_00911 | MCYG_07093 | C5FDY9 | C5FWJ0 | Phenylalanyl-tRNA synthetase. | 40S ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family. | 0.706 |
MCYG_00911 | MCYG_07169 | C5FDY9 | C5FXV2 | Phenylalanyl-tRNA synthetase. | 40S ribosomal protein S13; Belongs to the universal ribosomal protein uS13 family. | 0.706 |
MCYG_00911 | MCYG_07702 | C5FDY9 | C5FX43 | Phenylalanyl-tRNA synthetase. | 40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. | 0.875 |
MCYG_00911 | MCYG_08036 | C5FDY9 | C5FZB4 | Phenylalanyl-tRNA synthetase. | 40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. | 0.639 |
MCYG_00911 | MCYG_08519 | C5FDY9 | C5G0P7 | Phenylalanyl-tRNA synthetase. | Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. | 0.619 |
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