Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MCYG_01668 | MCYG_04628 | C5FHD0 | C5FNV6 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Nitrate reductase. | 0.978 |
MCYG_01668 | MCYG_05955 | C5FHD0 | C5FTD3 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | C2H2 type zinc finger domain-containing protein. | 0.735 |
MCYG_01917 | MCYG_05955 | C5FIB8 | C5FTD3 | Serine/arginine repetitive matrix protein 1. | C2H2 type zinc finger domain-containing protein. | 0.781 |
MCYG_02217 | MCYG_05955 | C5FJ68 | C5FTD3 | Uncharacterized protein. | C2H2 type zinc finger domain-containing protein. | 0.781 |
MCYG_03742 | MCYG_05955 | C5FJR2 | C5FTD3 | 37S ribosomal protein Mrp17. | C2H2 type zinc finger domain-containing protein. | 0.601 |
MCYG_03742 | MCYG_06218 | C5FJR2 | C5FU15 | 37S ribosomal protein Mrp17. | Mitochondrial ribosomal protein subunit S18. | 0.999 |
MCYG_03742 | MCYG_06629 | C5FJR2 | C5FV76 | 37S ribosomal protein Mrp17. | 40S ribosomal protein mrp4. | 0.999 |
MCYG_03742 | MCYG_08332 | C5FJR2 | C5G060 | 37S ribosomal protein Mrp17. | Ribosomal protein S20. | 0.999 |
MCYG_04174 | MCYG_05955 | C5FNB9 | C5FTD3 | RING finger domain-containing protein. | C2H2 type zinc finger domain-containing protein. | 0.781 |
MCYG_04628 | MCYG_01668 | C5FNV6 | C5FHD0 | Nitrate reductase. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.978 |
MCYG_04628 | MCYG_05955 | C5FNV6 | C5FTD3 | Nitrate reductase. | C2H2 type zinc finger domain-containing protein. | 0.735 |
MCYG_05955 | MCYG_01668 | C5FTD3 | C5FHD0 | C2H2 type zinc finger domain-containing protein. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.735 |
MCYG_05955 | MCYG_01917 | C5FTD3 | C5FIB8 | C2H2 type zinc finger domain-containing protein. | Serine/arginine repetitive matrix protein 1. | 0.781 |
MCYG_05955 | MCYG_02217 | C5FTD3 | C5FJ68 | C2H2 type zinc finger domain-containing protein. | Uncharacterized protein. | 0.781 |
MCYG_05955 | MCYG_03742 | C5FTD3 | C5FJR2 | C2H2 type zinc finger domain-containing protein. | 37S ribosomal protein Mrp17. | 0.601 |
MCYG_05955 | MCYG_04174 | C5FTD3 | C5FNB9 | C2H2 type zinc finger domain-containing protein. | RING finger domain-containing protein. | 0.781 |
MCYG_05955 | MCYG_04628 | C5FTD3 | C5FNV6 | C2H2 type zinc finger domain-containing protein. | Nitrate reductase. | 0.735 |
MCYG_05955 | MCYG_06218 | C5FTD3 | C5FU15 | C2H2 type zinc finger domain-containing protein. | Mitochondrial ribosomal protein subunit S18. | 0.607 |
MCYG_05955 | MCYG_06629 | C5FTD3 | C5FV76 | C2H2 type zinc finger domain-containing protein. | 40S ribosomal protein mrp4. | 0.602 |
MCYG_05955 | MCYG_08332 | C5FTD3 | C5G060 | C2H2 type zinc finger domain-containing protein. | Ribosomal protein S20. | 0.603 |
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