STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCYG_06173F-box protein. (488 aa)    
Predicted Functional Partners:
MCYG_06448
Bromodomain-containing protein BDF1.
    
 
 0.803
MCYG_04171
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.713
MCYG_05174
Uncharacterized protein; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.689
MCYG_03162
Histone H3.
    
  0.677
MCYG_04837
Histone H3.
    
  0.677
MCYG_00401
GRF zinc finger domain-containing protein.
    
  0.636
MCYG_01723
Uncharacterized protein.
    
  0.636
MCYG_05836
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
    
 
 0.533
MCYG_01252
DNA damage-responsive transcriptional repressor RPH1.
      
 0.439
MCYG_00400
Jumonji domain containing 5.
      
 0.434
Your Current Organism:
Microsporum canis
NCBI taxonomy Id: 554155
Other names: Arthroderma otae CBS 113480, M. canis CBS 113480, Microsporum canis CBS 113480, Microsporum canis CBS113480
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.