Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MCYG_00202 | MCYG_04295 | C5FBY0 | C5FPG0 | Prephenate dehydrogenase [NADP(+)]; Belongs to the prephenate/arogenate dehydrogenase family. | Tryptophan synthase. | 0.807 |
MCYG_00202 | MCYG_06969 | C5FBY0 | C5FW66 | Prephenate dehydrogenase [NADP(+)]; Belongs to the prephenate/arogenate dehydrogenase family. | Uncharacterized protein. | 0.668 |
MCYG_00202 | MCYG_08113 | C5FBY0 | C5FZJ1 | Prephenate dehydrogenase [NADP(+)]; Belongs to the prephenate/arogenate dehydrogenase family. | Phosphoserine phosphatase. | 0.513 |
MCYG_00260 | MCYG_02045 | C5FCC8 | C5FIF7 | Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Cysteine synthase. | 0.778 |
MCYG_00260 | MCYG_04295 | C5FCC8 | C5FPG0 | Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Tryptophan synthase. | 0.953 |
MCYG_00260 | MCYG_06969 | C5FCC8 | C5FW66 | Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Uncharacterized protein. | 0.702 |
MCYG_00260 | MCYG_07584 | C5FCC8 | C5FZ17 | Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Cysteine synthase 2. | 0.795 |
MCYG_00260 | MCYG_08113 | C5FCC8 | C5FZJ1 | Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Phosphoserine phosphatase. | 0.904 |
MCYG_01846 | MCYG_04295 | C5FI47 | C5FPG0 | RUM1p. | Tryptophan synthase. | 0.622 |
MCYG_01846 | MCYG_05929 | C5FI47 | C5FTA7 | RUM1p. | ATP synthase subunit gamma. | 0.996 |
MCYG_01846 | MCYG_06969 | C5FI47 | C5FW66 | RUM1p. | Uncharacterized protein. | 0.656 |
MCYG_02045 | MCYG_00260 | C5FIF7 | C5FCC8 | Cysteine synthase. | Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.778 |
MCYG_02045 | MCYG_04295 | C5FIF7 | C5FPG0 | Cysteine synthase. | Tryptophan synthase. | 0.914 |
MCYG_02045 | MCYG_06969 | C5FIF7 | C5FW66 | Cysteine synthase. | Uncharacterized protein. | 0.659 |
MCYG_02045 | MCYG_07584 | C5FIF7 | C5FZ17 | Cysteine synthase. | Cysteine synthase 2. | 0.877 |
MCYG_02045 | MCYG_07840 | C5FIF7 | C5FXI1 | Cysteine synthase. | Cysteine synthase B. | 0.526 |
MCYG_02045 | MCYG_08113 | C5FIF7 | C5FZJ1 | Cysteine synthase. | Phosphoserine phosphatase. | 0.668 |
MCYG_04295 | MCYG_00202 | C5FPG0 | C5FBY0 | Tryptophan synthase. | Prephenate dehydrogenase [NADP(+)]; Belongs to the prephenate/arogenate dehydrogenase family. | 0.807 |
MCYG_04295 | MCYG_00260 | C5FPG0 | C5FCC8 | Tryptophan synthase. | Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.953 |
MCYG_04295 | MCYG_01846 | C5FPG0 | C5FI47 | Tryptophan synthase. | RUM1p. | 0.622 |
page 1 of 3