STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCYG_06140SMB. (226 aa)    
Predicted Functional Partners:
MCYG_02257
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.998
MCYG_07890
LSM domain-containing protein.
   
 0.998
MCYG_04717
Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.
   
 0.997
MCYG_05084
Small nuclear ribonucleoprotein Sm D2.
   
 0.997
MCYG_07712
Small nuclear ribonucleoprotein G.
   
 0.997
MCYG_03621
U2 small nuclear ribonucleoprotein A.
   
 0.995
MCYG_07255
U1 small nuclear ribonucleoprotein A.
   
 0.994
MCYG_07782
1 U5 small nuclear ribonucleoprotein component.
   
 0.993
MCYG_05258
Splicing factor 3B subunit 4.
    
 0.992
MCYG_05893
mRNA splicing protein PRP8.
   
 0.992
Your Current Organism:
Microsporum canis
NCBI taxonomy Id: 554155
Other names: Arthroderma otae CBS 113480, M. canis CBS 113480, Microsporum canis CBS 113480, Microsporum canis CBS113480
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.