Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMPP | MCYG_04935 | C5FHR9 | C5FQG3 | Probable Xaa-Pro aminopeptidase P; Catalyzes the removal of a penultimate prolyl residue from the N-termini of peptides. | Xaa-pro dipeptidase. | 0.428 |
AMPP | MCYG_06187 | C5FHR9 | C5FTY4 | Probable Xaa-Pro aminopeptidase P; Catalyzes the removal of a penultimate prolyl residue from the N-termini of peptides. | Aspartyl aminopeptidase; Belongs to the peptidase M18 family. | 0.443 |
MCYG_00134 | MCYG_03306 | C5FBR2 | C5FLB5 | Autophagy-related protein. | Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. | 0.675 |
MCYG_00134 | MCYG_06176 | C5FBR2 | C5FTX3 | Autophagy-related protein. | Alpha-mannosidase. | 0.467 |
MCYG_00134 | MCYG_06187 | C5FBR2 | C5FTY4 | Autophagy-related protein. | Aspartyl aminopeptidase; Belongs to the peptidase M18 family. | 0.591 |
MCYG_00134 | MCYG_06464 | C5FBR2 | C5FUR1 | Autophagy-related protein. | Polyubiquitin. | 0.805 |
MCYG_00134 | MCYG_08272 | C5FBR2 | C5G000 | Autophagy-related protein. | ZZ type zinc finger domain-containing protein. | 0.998 |
MCYG_00682 | MCYG_03166 | C5FDJ8 | C5FKX5 | CP2 domain-containing protein. | Pre-mRNA-splicing factor rse1. | 0.437 |
MCYG_00682 | MCYG_06187 | C5FDJ8 | C5FTY4 | CP2 domain-containing protein. | Aspartyl aminopeptidase; Belongs to the peptidase M18 family. | 0.536 |
MCYG_00682 | MCYG_06464 | C5FDJ8 | C5FUR1 | CP2 domain-containing protein. | Polyubiquitin. | 0.597 |
MCYG_03166 | MCYG_00682 | C5FKX5 | C5FDJ8 | Pre-mRNA-splicing factor rse1. | CP2 domain-containing protein. | 0.437 |
MCYG_03166 | MCYG_06187 | C5FKX5 | C5FTY4 | Pre-mRNA-splicing factor rse1. | Aspartyl aminopeptidase; Belongs to the peptidase M18 family. | 0.437 |
MCYG_03166 | MCYG_06464 | C5FKX5 | C5FUR1 | Pre-mRNA-splicing factor rse1. | Polyubiquitin. | 0.481 |
MCYG_03306 | MCYG_00134 | C5FLB5 | C5FBR2 | Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. | Autophagy-related protein. | 0.675 |
MCYG_03306 | MCYG_06187 | C5FLB5 | C5FTY4 | Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. | Aspartyl aminopeptidase; Belongs to the peptidase M18 family. | 0.604 |
MCYG_03306 | MCYG_08272 | C5FLB5 | C5G000 | Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. | ZZ type zinc finger domain-containing protein. | 0.626 |
MCYG_04935 | AMPP | C5FQG3 | C5FHR9 | Xaa-pro dipeptidase. | Probable Xaa-Pro aminopeptidase P; Catalyzes the removal of a penultimate prolyl residue from the N-termini of peptides. | 0.428 |
MCYG_04935 | MCYG_06187 | C5FQG3 | C5FTY4 | Xaa-pro dipeptidase. | Aspartyl aminopeptidase; Belongs to the peptidase M18 family. | 0.518 |
MCYG_06176 | MCYG_00134 | C5FTX3 | C5FBR2 | Alpha-mannosidase. | Autophagy-related protein. | 0.467 |
MCYG_06176 | MCYG_06187 | C5FTX3 | C5FTY4 | Alpha-mannosidase. | Aspartyl aminopeptidase; Belongs to the peptidase M18 family. | 0.584 |
page 1 of 3