Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KRU23029.1ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (932 aa)    
Predicted Functional Partners:
KRU23087.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.783
KRU22476.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.744
KRU22478.1
Peptidase S41; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.705
KRU22479.1
Cytochrome C oxidase Cbb3; CcoN; FixN; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family.
 
     0.695
KRU22475.1
Cytochrome C oxidase Cbb3; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.690
KRU23135.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.676
KRU22474.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.482
KRU23030.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.442
KRU23031.1
Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits).
       0.442
KRU23134.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.441
Your Current Organism:
Psychrobacter piscatorii
NCBI taxonomy Id: 554343
Other names: JCM 15603, NCIMB 14510, P. piscatorii, Psychrobacter piscatorii Yumoto et al. 2010, Psychrobacter sp. JCM 15603, Psychrobacter sp. T-3-2, strain T-3-2
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