Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
KRU23598.1Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (637 aa)    
Predicted Functional Partners:
KRU23599.1
Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.660
KRU23600.1
DNA repair protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.597
KRU22292.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.562
KRU23197.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.536
KRU22908.1
Siderophore-interacting protein ViuB; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.504
AS194_12070
Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.504
KRU21226.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.500
KRU21744.1
Deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.499
KRU22414.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.499
KRU22550.1
ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.479
Your Current Organism:
Psychrobacter piscatorii
NCBI taxonomy Id: 554343
Other names: JCM 15603, NCIMB 14510, P. piscatorii, Psychrobacter piscatorii Yumoto et al. 2010, Psychrobacter sp. JCM 15603, Psychrobacter sp. T-3-2, strain T-3-2
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