STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRU22727.1General secretion pathway protein GspH; Derived by automated computational analysis using gene prediction method: Protein Homology. (186 aa)    
Predicted Functional Partners:
KRU23147.1
Peptidase M15A; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.647
AS194_05490
Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.644
KRU21287.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.613
KRU22925.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.612
KRU21800.1
Pilus assembly protein PilS; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.577
KRU21263.1
Pilus assembly protein PilQ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.560
KRU21922.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.525
KRU21214.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.520
KRU22761.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.515
KRU21283.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.495
Your Current Organism:
Psychrobacter piscatorii
NCBI taxonomy Id: 554343
Other names: JCM 15603, NCIMB 14510, P. piscatorii, Psychrobacter piscatorii Yumoto et al. 2010, Psychrobacter sp. JCM 15603, Psychrobacter sp. T-3-2, strain T-3-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.