KRU22070.1 protein (Psychrobacter piscatorii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

KRU22070.1

ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (330 aa)

Predicted Functional Partners:

KRU22071.1

0.994

KRU22072.1

0.989

KRU22075.1

0.988

KRU22064.1

0.756

KRU22931.1

0.752

KRU22151.1

0.752

KRU22785.1

0.725

KRU21417.1

0.723

KRU22065.1

0.682

KRU22786.1

0.629

Your Current Organism:

Psychrobacter piscatorii

NCBI taxonomy Id: 554343
Other names: JCM 15603, NCIMB 14510, P. piscatorii, Psychrobacter piscatorii Yumoto et al. 2010, Psychrobacter sp. JCM 15603, Psychrobacter sp. T-3-2, strain T-3-2

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KRU21417.1	KRU22064.1	AS194_03185	AS194_10040	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.922
KRU21417.1	KRU22065.1	AS194_03185	AS194_10045	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.970
KRU21417.1	KRU22070.1	AS194_03185	AS194_10075	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.723
KRU21417.1	KRU22071.1	AS194_03185	AS194_10080	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.893
KRU21417.1	KRU22072.1	AS194_03185	AS194_10085	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.967
KRU21417.1	KRU22075.1	AS194_03185	AS194_10090	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.875
KRU21417.1	KRU22151.1	AS194_03185	AS194_09615	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.752
KRU21417.1	KRU22785.1	AS194_03185	AS194_07215	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cysteine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.993
KRU21417.1	KRU22786.1	AS194_03185	AS194_07220	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polar amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.934
KRU21417.1	KRU22931.1	AS194_03185	AS194_06405	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Prephenate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.752
KRU22064.1	KRU21417.1	AS194_10040	AS194_03185	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.922
KRU22064.1	KRU22065.1	AS194_10040	AS194_10045	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.987
KRU22064.1	KRU22070.1	AS194_10040	AS194_10075	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.756
KRU22064.1	KRU22071.1	AS194_10040	AS194_10080	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.638
KRU22064.1	KRU22072.1	AS194_10040	AS194_10085	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.628
KRU22064.1	KRU22075.1	AS194_10040	AS194_10090	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.876
KRU22064.1	KRU22785.1	AS194_10040	AS194_07215	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cysteine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.616
KRU22064.1	KRU22786.1	AS194_10040	AS194_07220	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polar amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.876
KRU22065.1	KRU21417.1	AS194_10045	AS194_03185	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.970
KRU22065.1	KRU22064.1	AS194_10045	AS194_10040	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.987

page 1 of 4

Server load: medium (42%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Databases

Co-occurrence

Textmining

Co-expression

© STRING Consortium 2026

Credits

Access

Info

About