STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MPER_00305Integrase_H2C2 domain-containing protein. (204 aa)    
Predicted Functional Partners:
MPER_12650
Integrase catalytic domain-containing protein.
 
     0.547
MPER_12937
Uncharacterized protein.
  
     0.506
MPER_12974
RT_RNaseH_2 domain-containing protein.
 
     0.506
MPER_05140
RT_RNaseH_2 domain-containing protein.
  
     0.502
MPER_12483
RT_RNaseH domain-containing protein.
  
     0.501
MPER_12489
Reverse transcriptase domain-containing protein.
 
     0.496
MPER_13116
Reverse transcriptase domain-containing protein.
  
     0.496
MPER_12301
Reverse transcriptase domain-containing protein.
  
     0.494
MPER_13097
Reverse transcriptase domain-containing protein.
  
     0.489
MPER_12870
Reverse transcriptase domain-containing protein.
  
     0.487
Your Current Organism:
Moniliophthora perniciosa
NCBI taxonomy Id: 554373
Other names: M. perniciosa FA553, Moniliophthora perniciosa FA553
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.