MPER_12244 protein (Moniliophthora perniciosa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

MPER_12244

3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate. (230 aa)

Predicted Functional Partners:

MPER_06222

0.967

MPER_06130

0.892

MPER_03880

0.784

MPER_09259

0.661

MPER_03525

0.595

MPER_04950

0.558

MPER_08984

0.531

MPER_06761

0.455

MPER_10787

0.455

MPER_13131

0.455

Your Current Organism:

Moniliophthora perniciosa

NCBI taxonomy Id: 554373
Other names: M. perniciosa FA553, Moniliophthora perniciosa FA553

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MPER_03525	MPER_04950	E2LBJ8	E2LF10	Uncharacterized protein.	Uncharacterized protein.	0.521
MPER_03525	MPER_06222	E2LBJ8	E2LI58	Uncharacterized protein.	6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.	0.768
MPER_03525	MPER_08984	E2LBJ8	E2LQ06	Uncharacterized protein.	GTP_cyclohydro2 domain-containing protein.	0.595
MPER_03525	MPER_09259	E2LBJ8	E2LQP0	Uncharacterized protein.	Flavokinase domain-containing protein.	0.511
MPER_03525	MPER_12244	E2LBJ8	E2LY64	Uncharacterized protein.	3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate.	0.595
MPER_03880	MPER_04950	E2LCF1	E2LF10	Uncharacterized protein.	Uncharacterized protein.	0.421
MPER_03880	MPER_06222	E2LCF1	E2LI58	Uncharacterized protein.	6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.	0.979
MPER_03880	MPER_08984	E2LCF1	E2LQ06	Uncharacterized protein.	GTP_cyclohydro2 domain-containing protein.	0.785
MPER_03880	MPER_09259	E2LCF1	E2LQP0	Uncharacterized protein.	Flavokinase domain-containing protein.	0.825
MPER_03880	MPER_12244	E2LCF1	E2LY64	Uncharacterized protein.	3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate.	0.784
MPER_04950	MPER_03525	E2LF10	E2LBJ8	Uncharacterized protein.	Uncharacterized protein.	0.521
MPER_04950	MPER_03880	E2LF10	E2LCF1	Uncharacterized protein.	Uncharacterized protein.	0.421
MPER_04950	MPER_06130	E2LF10	E2LHX9	Uncharacterized protein.	Lumazine-binding domain-containing protein.	0.421
MPER_04950	MPER_06222	E2LF10	E2LI58	Uncharacterized protein.	6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.	0.612
MPER_04950	MPER_08984	E2LF10	E2LQ06	Uncharacterized protein.	GTP_cyclohydro2 domain-containing protein.	0.558
MPER_04950	MPER_09259	E2LF10	E2LQP0	Uncharacterized protein.	Flavokinase domain-containing protein.	0.677
MPER_04950	MPER_12244	E2LF10	E2LY64	Uncharacterized protein.	3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate.	0.558
MPER_06130	MPER_04950	E2LHX9	E2LF10	Lumazine-binding domain-containing protein.	Uncharacterized protein.	0.421
MPER_06130	MPER_06222	E2LHX9	E2LI58	Lumazine-binding domain-containing protein.	6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.	0.998
MPER_06130	MPER_08984	E2LHX9	E2LQ06	Lumazine-binding domain-containing protein.	GTP_cyclohydro2 domain-containing protein.	0.785