STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MPER_12556Uncharacterized protein. (362 aa)    
Predicted Functional Partners:
MPER_00477
Reverse transcriptase domain-containing protein.
 
     0.933
MPER_12489
Reverse transcriptase domain-containing protein.
 
     0.917
MPER_12301
Reverse transcriptase domain-containing protein.
 
     0.847
MPER_12920
Reverse transcriptase domain-containing protein.
 
     0.804
MPER_09285
Reverse transcriptase domain-containing protein.
 
     0.783
MPER_12974
RT_RNaseH_2 domain-containing protein.
 
     0.756
MPER_13097
Reverse transcriptase domain-containing protein.
 
     0.753
MPER_13155
Reverse transcriptase domain-containing protein.
 
     0.748
MPER_03181
RT_RNaseH domain-containing protein.
 
     0.744
MPER_12870
Reverse transcriptase domain-containing protein.
 
     0.734
Your Current Organism:
Moniliophthora perniciosa
NCBI taxonomy Id: 554373
Other names: M. perniciosa FA553, Moniliophthora perniciosa FA553
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