STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MPER_13098Retrotrans_gag domain-containing protein. (342 aa)    
Predicted Functional Partners:
MPER_03657
HTH myb-type domain-containing protein.
    
 0.776
MPER_07859
Uncharacterized protein.
  
 
 0.743
MPER_03761
Uncharacterized protein.
  
 
 0.648
MPER_09819
Uncharacterized protein.
  
 
 0.648
MPER_14778
Uncharacterized protein.
  
 
 0.648
MPER_04062
Uncharacterized protein.
   
   0.642
MPER_05951
Uncharacterized protein.
   
 0.624
MPER_03250
Tr-type G domain-containing protein.
   
 0.575
MPER_03754
GTP_EFTU_D2 domain-containing protein.
   
 0.575
MPER_07626
EFG_IV domain-containing protein; Belongs to the calreticulin family.
   
 0.575
Your Current Organism:
Moniliophthora perniciosa
NCBI taxonomy Id: 554373
Other names: M. perniciosa FA553, Moniliophthora perniciosa FA553
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.