STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MPER_15736Uncharacterized protein. (57 aa)    
Predicted Functional Partners:
MPER_10465
Rad51 domain-containing protein.
    
 0.748
MPER_13584
Uncharacterized protein; Belongs to the histidinol dehydrogenase family.
     
 0.732
MPER_01996
Uncharacterized protein.
    
 0.719
MPER_02938
RECA_3 domain-containing protein.
    
 0.719
MPER_13951
Rad21_Rec8 domain-containing protein.
    
 
 0.713
MPER_02156
Uncharacterized protein.
    
 0.666
MPER_13524
RECA_3 domain-containing protein.
    
 0.666
MPER_14345
RECA_2 domain-containing protein.
    
 0.666
MPER_11834
LZ3wCH domain-containing protein.
    
 
 0.643
MPER_12103
DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.
      
 0.620
Your Current Organism:
Moniliophthora perniciosa
NCBI taxonomy Id: 554373
Other names: M. perniciosa FA553, Moniliophthora perniciosa FA553
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