STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MPER_15952RRM domain-containing protein. (110 aa)    
Predicted Functional Partners:
MPER_01533
NOP5NT domain-containing protein.
   
 
 0.929
MPER_00676
Uncharacterized protein.
   
 
 0.920
MPER_06750
Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family.
   
    0.880
MPER_10834
Uncharacterized protein.
   
   0.861
MPER_08245
Nop domain-containing protein.
   
 
 0.828
MPER_05797
SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
 
 0.802
MPER_06598
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
   
 
 0.799
MPER_02507
OBG-type G domain-containing protein.
   
 
 0.789
MPER_03821
Brix domain-containing protein.
   
 
 0.745
MPER_04228
Uncharacterized protein.
   
   0.741
Your Current Organism:
Moniliophthora perniciosa
NCBI taxonomy Id: 554373
Other names: M. perniciosa FA553, Moniliophthora perniciosa FA553
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.