Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Toce_0034Sporulation peptidase YabG; InterPro IPR008764; KEGG: dhd:Dhaf_0082 sporulation peptidase YabG; PFAM: peptidase U57 YabG; SPTR: Sporulation peptidase YabG; TIGRFAM: sporulation peptidase YabG; PFAM: YabG peptidase U57; TIGRFAM: sporulation peptidase YabG. (285 aa)    
Predicted Functional Partners:
Toce_0035
SpoIID/LytB domain protein; COGs: COG2385 Sporulation protein and related protein; InterPro IPR014225:IPR013486:IPR013693:IPR002508; KEGG: aoe:Clos_0281 SpoIID/LytB domain-containing protein; PFAM: cell wall hydrolase/autolysin; Stage II sporulation D domain protein; SMART: cell wall hydrolase/autolysin; SPTR: SpoIID/LytB domain; TIGRFAM: SpoIID/LytB domain protein; stage II sporulation protein D; PFAM: N-acetylmuramoyl-L-alanine amidase; Stage II sporulation protein; TIGRFAM: SpoIID/LytB domain; stage II sporulation protein D.
     
 0.754
Toce_0033
InterPro IPR001173; KEGG: adg:Adeg_2109 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase, family 2; PFAM: Glycosyl transferase family 2.
 
    0.735
Toce_0980
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
  
   
 0.614
Toce_1318
InterPro IPR014194; KEGG: dae:Dtox_2607 stage III sporulation protein AE; PFAM: Sporulation stage III protein AE; SPTR: Stage III sporulation protein AE; TIGRFAM: stage III sporulation protein AE; PFAM: Stage III sporulation protein AE (spore_III_AE); TIGRFAM: stage III sporulation protein AE.
  
   
 0.613
Toce_0036
Protein of unknown function DUF1021; COGs: COG4466 Uncharacterized protein; InterPro IPR009366; KEGG: amt:Amet_4610 hypothetical protein; PFAM: protein of unknown function DUF1021; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1021).
       0.564
Toce_1411
Sporulation protein YtxC; InterPro IPR014199; KEGG: dae:Dtox_2403 sporulation protein YtxC; PFAM: Sporulation protein YtxC; SPTR: Putative uncharacterized protein; PFAM: YtxC-like family; TIGRFAM: putative sporulation protein YtxC.
  
     0.543
Toce_1319
InterPro IPR014211; KEGG: dae:Dtox_2608 stage III sporulation protein AD; SPTR: Stage III sporulation protein AD; TIGRFAM: stage III sporulation protein AD; PFAM: Stage III sporulation protein AC/AD protein family; TIGRFAM: stage III sporulation protein AD.
  
     0.536
Toce_1142
Sporulation protein YtfJ; COGs: COG3874 conserved hypothetical protein; InterPro IPR014229; KEGG: tte:TTE1327 hypothetical protein; PFAM: Sporulation protein YtfJ; SPTR: Sporulation protein YtfJ; TIGRFAM: sporulation protein YtfJ; PFAM: Sporulation protein YtfJ (Spore_YtfJ); TIGRFAM: sporulation protein YtfJ.
  
     0.525
gpr
Spore protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
  
 0.520
Toce_2262
Sporulation protein YyaC; InterPro IPR009665:IPR005080; KEGG: gyc:GYMC61_3551 sporulation protein YyaC; PFAM: protein of unknown function DUF1256; SPTR: Hypothetical conserved protein; TIGRFAM: sporulation protein YyaC; PFAM: Protein of unknown function (DUF1256); TIGRFAM: putative sporulation protein YyaC.
  
     0.498
Your Current Organism:
Thermosediminibacter oceani
NCBI taxonomy Id: 555079
Other names: T. oceani DSM 16646, Thermosediminibacter oceani DSM 16646, Thermosediminibacter oceani JW/IW-1228P, Thermosediminibacter oceani str. DSM 16646, Thermosediminibacter oceani strain DSM 16646
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