STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Experiments
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[Homology]
Score
Toce_0054Transcriptional antiterminator, BglG; COGs: COG3711 Transcriptional antiterminator; InterPro IPR011608:IPR002178:IPR013011; KEGG: amt:Amet_4270 transcriptional antiterminator, BglG; PFAM: PRD domain protein; PRIAM: Protein-N(pi)-phosphohistidine--sugar phosphotransferase; SPTR: Transcriptional antiterminator, BglG; PFAM: HTH domain; Mga helix-turn-helix domain; PTS system, Lactose/Cellobiose specific IIB subunit; PRD domain; Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2. (689 aa)    
Predicted Functional Partners:
mtlD
D-mannitol 1-phosphate 5-dehydrogenase; COGs: COG0246 Mannitol-1-phosphate/altronate dehydrogenase; InterPro IPR013131:IPR013118:IPR000669; KEGG: bbe:BBR47_56360 mannitol-1-phosphate 5-dehydrogenase; PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; SPTR: Mannitol-1-phosphate 5-dehydrogenase; PFAM: Mannitol dehydrogenase C-terminal domain; Mannitol dehydrogenase Rossmann domain.
  
 0.932
Toce_0264
Transcriptional antiterminator, BglG; COGs: COG3711 Transcriptional antiterminator; InterPro IPR007737:IPR011608:IPR002178:IPR013011; KEGG: cdf:CD3083 transcription antiterminator; PFAM: PRD domain protein; M trans-acting positive regulator; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; PRIAM: Protein-N(pi)-phosphohistidine--sugar phosphotransferase; SPTR: Putative uncharacterized protein; PFAM: HTH domain; Mga helix-turn-helix domain; PRD domain; Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2.
 
  
0.868
Toce_1436
PTS system, glucitol/sorbitol-specific, IIC subunit; COGs: COG3730 Phosphotransferase system sorbitol-specific component IIC; InterPro IPR004699; KEGG: bha:BH0771 PTS system, glucitol/sorbitol-specific enzyme II, C2 component (permease); PFAM: PTS system protein II sorbitol-specific factor; SPTR: PTS system, glucitol/sorbitol-specific enzyme II, C2 component (Permease); TIGRFAM: PTS system, glucitol/sorbitol-specific, IIC subunit; PFAM: PTS system enzyme II sorbitol-specific factor; TIGRFAM: PTS system, glucitol/sorbitol-specific, IIC component.
 
  
 0.778
Toce_1444
PTS system D-arabitol-specific IIC component, Gat family (TC 4.A.5.1.2); COGs: COG3775 Phosphotransferase system galactitol-specific IIC component; InterPro IPR013853:IPR004703:IPR013014; KEGG: cbe:Cbei_2500 PTS system galactitol-specific IIC component; PFAM: PTS system Galactitol-specific IIC component; SPTR: PTS system, galactitol-specific IIC subunit; TIGRFAM: PTS system, galactitol-specific IIC subunit; PFAM: PTS system sugar-specific permease component; TIGRFAM: PTS system, galactitol-specific IIC component.
 
  
 0.768
Toce_1447
PTS system transcriptional activator; COGs: COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain; InterProIPR002078:IPR011608:IPR004701:IPR002178:IPR 003593:IPR003006:IPR002464; KEGG: tte:TTE0180 transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; PRD domain protein; PTS system fructose subfamily IIA component; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; SMART: AAA ATPase; SPTR: Sigma-54 interaction domain family protein; PFAM: PTS system fructose IIA component; Sigma-54 interactio [...]
 
  
 0.749
Toce_1437
COGs: COG4578 Glucitol operon activator; InterPro IPR009693; KEGG: cby:CLM_3883 glucitol operon activator protein; PFAM: Glucitol operon activator; SPTR: Glucitol operon activator protein; PFAM: Glucitol operon activator protein (GutM).
 
  
 0.727
Toce_1446
Putative PTS IIA-like nitrogen-regulatory protein PtsN; COGs: COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); InterPro IPR002178; KEGG: tpd:Teth39_2081 putative PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; SPTR: Putative PTS IIA-like nitrogen-regulatory protein PtsN; manually curated; PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2.
 
  
 0.713
Toce_1435
COGs: COG3732 Phosphotransferase system sorbitol-specific component IIBC; InterPro IPR011618:IPR011638; KEGG: bha:BH0772 PTS system, glucitol/sorbitol-specific enzyme II, BC component (EIIBC-GUT); PFAM: Sorbitol phosphotransferase protein II domain protein; PRIAM: Protein-N(pi)-phosphohistidine--sugar phosphotransferase; SPTR: PTS system, glucitol/sorbitol-specific enzyme II, BC component (EIIBC-GUT); PFAM: Sorbitol phosphotransferase enzyme II C-terminus; Sorbitol phosphotransferase enzyme II N-terminus; TIGRFAM: PTS system, glucitol/sorbitol-specific, IIBC component.
 
    0.675
Toce_1982
COGs: COG1447 Phosphotransferase system cellobiose-specific component IIA; InterPro IPR003188; KEGG: tpd:Teth39_1697 phosphotransferase system PTS, lactose/cellobiose-specific IIA subunit; PFAM: phosphotransferase system PTS lactose/cellobiose-specific IIA subunit; SPTR: Phosphotransferase system cellobiose-specific component IIA; PFAM: PTS system, Lactose/Cellobiose specific IIA subunit.
 
  
 0.652
Toce_1434
COGs: COG3731 Phosphotransferase system sorbitol-specific component IIA; InterPro IPR004716; KEGG: chl:Chy400_1450 PTS system glucitol/sorbitol-specific IIA component; PFAM: PTS system glucitol/sorbitol-specific IIA component; SPTR: PTS system glucitol/sorbitol-specific IIA component; PFAM: PTS system glucitol/sorbitol-specific IIA component.
 
  
 0.649
Your Current Organism:
Thermosediminibacter oceani
NCBI taxonomy Id: 555079
Other names: T. oceani DSM 16646, Thermosediminibacter oceani DSM 16646, Thermosediminibacter oceani JW/IW-1228P, Thermosediminibacter oceani str. DSM 16646, Thermosediminibacter oceani strain DSM 16646
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