Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ecfTCobalt transport protein; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. (265 aa)    
Predicted Functional Partners:
ecfA
Cobalt ABC transporter, ATPase subunit; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 0.999
ecfA-2
ABC transporter related protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 0.999
Toce_0307
Cobalt ABC transporter, ATPase subunit; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
 
 0.986
Toce_0586
Cobalt ABC transporter, ATPase subunit; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
 
 0.977
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
 
  
 0.973
Toce_0733
BioY protein; COGs: COG1268 conserved hypothetical protein; InterPro IPR003784; KEGG: tte:TTE0777 uncharacterized ACR; PFAM: BioY protein; SPTR: Uncharacterized ACR; PFAM: BioY family.
 
 0.968
Toce_0350
ABC transporter related protein; COGs: COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase; InterPro IPR003439:IPR017871:IPR003593; KEGG: mta:Moth_1456 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related; PFAM: ABC transporter; TIGRFAM: cobalt transport protein ATP-binding subunit.
 
 0.962
Toce_0349
Cobalt transport protein; InterPro IPR003339; KEGG: mta:Moth_1457 cobalt transport protein; PFAM: cobalt transport protein; SPTR: Cobalt transport protein; PFAM: Cobalt transport protein.
     
  0.900
Toce_2085
COGs: COG4684 membrane protein; KEGG: tpd:Teth39_0308 membrane protein-like protein; SPTR: Membrane protein-like protein.
 
 
 
 0.892
Toce_0174
Protein of unknown function DUF1393; COGs: COG4720 membrane protein; KEGG: aco:Amico_1479 protein of unknown function DUF1393; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1393).
 
 
 0.852
Your Current Organism:
Thermosediminibacter oceani
NCBI taxonomy Id: 555079
Other names: T. oceani DSM 16646, Thermosediminibacter oceani DSM 16646, Thermosediminibacter oceani JW/IW-1228P, Thermosediminibacter oceani str. DSM 16646, Thermosediminibacter oceani strain DSM 16646
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