Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Toce_0238COGs: COG5423 metal-binding protein; InterPro IPR019271; KEGG: pth:PTH_2051 hypothetical protein; PFAM: Protein of unknown function DUF2284, metal-binding; SPTR: Putative uncharacterized protein; PFAM: Predicted metal-binding protein (DUF2284). (190 aa)    
Predicted Functional Partners:
Toce_0239
Copper amine oxidase domain protein; COGs: COG3858 glycosyl hydrolase; InterPro IPR012854:IPR001223:IPR011583:IPR001579; KEGG: swo:Swol_1871 glycosyl hydrolase-like protein; PFAM: copper amine oxidase domain protein; glycoside hydrolase family 18; SMART: chitinase II; SPTR: Copper amine oxidase domain protein; PFAM: Copper amine oxidase N-terminal domain; Glycosyl hydrolases family 18; Belongs to the glycosyl hydrolase 18 family.
 
     0.757
Toce_0788
KEGG: dhd:Dhaf_2572 protein of unknown function DUF1638; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1638).
 
     0.544
Toce_0791
KEGG: amt:Amet_2095 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Uroporphyrinogen decarboxylase (URO-D).
  
     0.481
Toce_0893
Xylose isomerase domain protein TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: ctc:CTC00572 hypothetical protein; PFAM: Xylose isomerase domain protein TIM barrel; SPTR: Conserved protein; PFAM: Xylose isomerase-like TIM barrel.
  
     0.449
Toce_0801
Cobyrinic acid a,c-diamide synthase; COGs: COG3640 CO dehydrogenase maturation factor; InterPro IPR014433; KEGG: amt:Amet_2017 cobyrinic acid a,c-diamide synthase; SPTR: Cobyrinic acid ac-diamide synthase; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
  
     0.436
Toce_0240
KEGG: tpd:Teth39_1732 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF322).
       0.430
Toce_0810
COGs: COG2069 CO dehydrogenase/acetyl-CoA synthase delta subunit (corrinoid Fe-S protein); InterPro IPR016041; KEGG: amt:Amet_2025 acetyl-CoA decarbonylase/synthase complex subunit delta; PFAM: CO dehydrogenase/acetyl-CoA synthase delta subunit, TIM barrel; SPTR: CO dehydrogenase/acetyl-CoA synthase delta subunit; PFAM: CO dehydrogenase/acetyl-CoA synthase delta subunit.
  
     0.420
Your Current Organism:
Thermosediminibacter oceani
NCBI taxonomy Id: 555079
Other names: T. oceani DSM 16646, Thermosediminibacter oceani DSM 16646, Thermosediminibacter oceani JW/IW-1228P, Thermosediminibacter oceani str. DSM 16646, Thermosediminibacter oceani strain DSM 16646
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.