STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Toce_0269COGs: COG1440 Phosphotransferase system cellobiose-specific component IIB; InterPro IPR003501:IPR013012; KEGG: tai:Taci_0332 phosphotransferase system lactose/cellobiose-specific IIB subunit; PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; SPTR: Phosphotransferase system lactose/cellobiose-specific IIB subunit; PFAM: PTS system, Lactose/Cellobiose specific IIB subunit; TIGRFAM: PTS system, lactose/cellobiose family IIB component. (102 aa)    
Predicted Functional Partners:
Toce_0265
COGs: COG1447 Phosphotransferase system cellobiose-specific component IIA; InterPro IPR003188; KEGG: tte:TTE0336 phosphotransferase system cellobiose-specific component IIA; PFAM: phosphotransferase system PTS lactose/cellobiose-specific IIA subunit; SPTR: Phosphotransferase system cellobiose-specific component IIA; PFAM: PTS system, Lactose/Cellobiose specific IIA subunit.
 
 0.997
Toce_0340
COGs: COG1447 Phosphotransferase system cellobiose-specific component IIA; InterPro IPR003188; KEGG: sha:SH0190 hypothetical protein; PFAM: phosphotransferase system PTS lactose/cellobiose-specific IIA subunit; SPTR: Similar to phosphotransferase system; PFAM: PTS system, Lactose/Cellobiose specific IIA subunit.
 
 0.996
Toce_1982
COGs: COG1447 Phosphotransferase system cellobiose-specific component IIA; InterPro IPR003188; KEGG: tpd:Teth39_1697 phosphotransferase system PTS, lactose/cellobiose-specific IIA subunit; PFAM: phosphotransferase system PTS lactose/cellobiose-specific IIA subunit; SPTR: Phosphotransferase system cellobiose-specific component IIA; PFAM: PTS system, Lactose/Cellobiose specific IIA subunit.
 
 0.996
Toce_0267
PTS system, lactose/cellobiose family IIC subunit; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
 
 0.995
Toce_0339
PTS system, lactose/cellobiose family IIC subunit; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
 
 0.986
Toce_1983
PTS system, lactose/cellobiose family IIC subunit; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
 
 0.986
Toce_0345
6-phospho-beta-glucosidase; COGs: COG1486 Alpha-galactosidase/6-phospho-beta-glucosidase family 4 of glycosyl hydrolase; InterPro IPR019802:IPR001088; KEGG: tte:TTE0337 alpha-galactosidase/6-phospho-beta-glucosidase; PFAM: glycoside hydrolase family 4; SPTR: Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases; PFAM: Family 4 glycosyl hydrolase; Family 4 glycosyl hydrolase C-terminal domain.
 
 
 0.932
Toce_1700
Glycoside hydrolase family 4; COGs: COG1486 Alpha-galactosidase/6-phospho-beta-glucosidase family 4 of glycosyl hydrolase; InterPro IPR001088; KEGG: amt:Amet_4185 glycoside hydrolase family protein; PFAM: glycoside hydrolase family 4; SPTR: Glycoside hydrolase, family 4; PFAM: Family 4 glycosyl hydrolase; Family 4 glycosyl hydrolase C-terminal domain.
  
 
 0.917
Toce_1984
COGs: COG1440 Phosphotransferase system cellobiose-specific component IIB; InterPro IPR003501:IPR013012; KEGG: tit:Thit_0585 phosphotransferase system lactose/cellobiose-specific IIB subunit; PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; SPTR: Phosphotransferase system, lactose/cellobiose-specific IIB subunit; PFAM: PTS system, Lactose/Cellobiose specific IIB subunit.
  
  
 
0.915
Toce_0338
COGs: COG1440 Phosphotransferase system cellobiose-specific component IIB; InterPro IPR013012:IPR003501; KEGG: amt:Amet_4188 phosphotransferase system, lactose/cellobiose-specific IIB subunit; PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; SPTR: PTS system; PFAM: PTS system, Lactose/Cellobiose specific IIB subunit.
  
  
 
0.911
Your Current Organism:
Thermosediminibacter oceani
NCBI taxonomy Id: 555079
Other names: T. oceani DSM 16646, Thermosediminibacter oceani DSM 16646, Thermosediminibacter oceani JW/IW-1228P, Thermosediminibacter oceani str. DSM 16646, Thermosediminibacter oceani strain DSM 16646
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