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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Toce_0271InterPro IPR011701; KEGG: dge:Dgeo_1065 major facilitator transporter; PFAM: major facilitator superfamily MFS_1; SPTR: Major facilitator superfamily MFS_1; PFAM: Major Facilitator Superfamily. (420 aa)    
Predicted Functional Partners:
Toce_2007
KEGG: swo:Swol_2165 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.606
Toce_0272
Molybdopterin molybdochelatase; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
   
   0.552
Toce_0273
Molybdopterin molybdochelatase; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
   
 
 0.535
Toce_2197
Peptidoglycan-binding domain 1 protein; COGs: COG1520 FOG: WD40-like repeat; InterPro IPR018391:IPR002477:IPR002372; KEGG: chl:Chy400_4120 serine/threonine protein kinase; PFAM: Peptidoglycan-binding domain 1 protein; Pyrrolo-quinoline quinone; SPTR: Similar to beta-propeller protein YxaL; PFAM: Putative peptidoglycan binding domain; PQQ enzyme repeat.
  
   
 0.512
moaC
GTP cyclohydrolase subunit MoaC; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.
  
    0.504
moaA
GTP cyclohydrolase subunit MoaA; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
       0.495
Toce_0276
Molybdenum cofactor synthesis domain protein; COGs: COG0521 Molybdopterin biosynthesis protein; InterPro IPR020817:IPR005302:IPR001453:IPR008284; KEGG: ddf:DEFDS_0070 hypothetical protein; PFAM: molybdopterin binding domain; MOSC domain containing protein; SPTR: Putative uncharacterized protein; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: MOSC domain; Probable molybdopterin binding domain; TIGRFAM: molybdenum cofactor synthesis domain.
       0.495
Toce_1971
KEGG: nth:Nther_2043 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.490
Toce_0718
InterPro IPR018649; KEGG: sat:SYN_02429 hypothetical protein; PFAM: Protein of unknown function DUF2078, membrane; SPTR: Hypothetical membrane protein; PFAM: Predicted membrane protein (DUF2078).
  
     0.483
Toce_1608
Domain of unknown function DUF1850; COGs: COG4729 conserved hypothetical protein; InterPro IPR015001; KEGG: drm:Dred_3212 hypothetical protein; PFAM: Domain of unknown function DUF1850; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF1850).
  
     0.464
Your Current Organism:
Thermosediminibacter oceani
NCBI taxonomy Id: 555079
Other names: T. oceani DSM 16646, Thermosediminibacter oceani DSM 16646, Thermosediminibacter oceani JW/IW-1228P, Thermosediminibacter oceani str. DSM 16646, Thermosediminibacter oceani strain DSM 16646
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