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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Toce_0375InterPro IPR001453; KEGG: mta:Moth_1778 molybdopterin binding domain-containing protein; PFAM: molybdopterin binding domain; SPTR: Molybdopterin binding domain; PFAM: Probable molybdopterin binding domain; TIGRFAM: molybdenum cofactor synthesis domain. (307 aa)    
Predicted Functional Partners:
Toce_0374
Quinolinate phosphoribosyl transferase; COGs: COG0157 Nicotinate-nucleotide pyrophosphorylase; InterPro IPR002638; KEGG: mta:Moth_1779 nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase; SPTR: Nicotinate-nucleotide pyrophosphorylase (Carboxylating); PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal domain.
   
 0.986
Toce_0379
BFD domain protein (2Fe-2S)-binding domain protein; COGs: COG4231 Indolepyruvate ferredoxin oxidoreductase alpha and beta subunits; InterPro IPR017896:IPR017900:IPR007419; KEGG: chy:CHY_1274 iron-sulfur cluster-binding protein; PFAM: BFD domain protein [2Fe-2S]-binding domain protein; SPTR: Iron-sulfur cluster-binding protein; PFAM: 4Fe-4S binding domain; BFD-like [2Fe-2S] binding domain.
 
     0.938
Toce_0376
COGs: COG3971 2-keto-4-pentenoate hydratase; InterPro IPR002529; KEGG: mta:Moth_1777 4-oxalocrotonate decarboxylase; PFAM: fumarylacetoacetate (FAA) hydrolase; PRIAM: 2-oxopent-4-enoate hydratase; SPTR: 4-oxalocrotonate decarboxylase; PFAM: Fumarylacetoacetate (FAA) hydrolase family; TIGRFAM: 2-oxopent-4-enoate hydratase.
 
     0.886
Toce_0377
Acetaldehyde dehydrogenase; Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds.
 
     0.847
Toce_0381
Benzoate transporter; COGs: COG3135 Uncharacterized protein involved in benzoate metabolism; InterPro IPR003016:IPR004711; KEGG: mta:Moth_1772 benzoate transporter; PFAM: Benzoate membrane transport protein; SPTR: Benzoate transporter; TIGRFAM: benzoate transporter; PFAM: Benzoate membrane transport protein; TIGRFAM: benzoate transporter.
 
     0.805
Toce_0378
4-hydroxy-2-oxovalerate aldolase; Catalyzes the retro-aldol cleavage of 4-hydroxy-2- oxopentanoate to pyruvate and acetaldehyde. Is involved in the meta- cleavage pathway for the degradation of aromatic compounds. Belongs to the 4-hydroxy-2-oxovalerate aldolase family.
 
     0.783
Toce_0380
KEGG: mta:Moth_1773 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.750
Toce_1539
Protein of unknown function DUF342; COGs: COG1315 polymerase most protein contain PALM domain HD hydrolase domain and Zn-ribbon domain; InterPro IPR005646; KEGG: mta:Moth_0394 hypothetical protein; PFAM: protein of unknown function DUF342; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF342); TIGRFAM: septum site-determining protein MinC.
  
     0.644
Toce_0349
Cobalt transport protein; InterPro IPR003339; KEGG: mta:Moth_1457 cobalt transport protein; PFAM: cobalt transport protein; SPTR: Cobalt transport protein; PFAM: Cobalt transport protein.
 
     0.629
Toce_0383
COGs: COG2414 Aldehyde:ferredoxin oxidoreductase; InterPro IPR013983:IPR001203; KEGG: chy:CHY_1712 aldehyde ferredoxin oxidoreductase, tungsten-containing; PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase; PRIAM: Aldehyde ferredoxin oxidoreductase; SMART: Aldehyde ferredoxin oxidoreductase; SPTR: Aldehyde ferredoxin oxidoreductase, tungsten-containing; PFAM: Aldehyde ferredoxin oxidoreductase, N-terminal domain; Aldehyde ferredoxin oxidoreductase, domains 2 & 3.
 
     0.585
Your Current Organism:
Thermosediminibacter oceani
NCBI taxonomy Id: 555079
Other names: T. oceani DSM 16646, Thermosediminibacter oceani DSM 16646, Thermosediminibacter oceani JW/IW-1228P, Thermosediminibacter oceani str. DSM 16646, Thermosediminibacter oceani strain DSM 16646
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