Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Toce_0408Transposase IS116/IS110/IS902 family protein; COGs: COG3547 Transposase and inactivated derivatives; InterPro IPR003346; KEGG: pth:PTH_2606 transposase; PFAM: transposase IS116/IS110/IS902 family protein; SPTR: Hypothetical transposase; PFAM: Transposase IS116/IS110/IS902 family; Transposase. (407 aa)    
Predicted Functional Partners:
Toce_0415
SAF domain protein; InterPro IPR013974; KEGG: aco:Amico_1202 Flp pilus assembly protein CpaB; PFAM: SAF domain protein; SPTR: SAF domain protein; PFAM: SAF domain; TIGRFAM: Flp pilus assembly protein CpaB.
 
     0.413
Your Current Organism:
Thermosediminibacter oceani
NCBI taxonomy Id: 555079
Other names: T. oceani DSM 16646, Thermosediminibacter oceani DSM 16646, Thermosediminibacter oceani JW/IW-1228P, Thermosediminibacter oceani str. DSM 16646, Thermosediminibacter oceani strain DSM 16646
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.