Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Toce_0478Protein of unknown function DUF1659; InterPro IPR012454; KEGG: mta:Moth_1793 hypothetical protein; PFAM: protein of unknown function DUF1659; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1659). (74 aa)    
Predicted Functional Partners:
Toce_0477
KEGG: mta:Moth_1792 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2922).
 
     0.911
Toce_0474
KEGG: amt:Amet_0695 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.768
Toce_0475
InterPro IPR002502; KEGG: dau:Daud_1669 N-acetylmuramoyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: N-acetylmuramoyl-L-alanine amidase family 2; SPTR: N-acetylmuramoyl-L-alanine amidase, family 2; PFAM: N-acetylmuramoyl-L-alanine amidase.
 
     0.710
Toce_0476
KEGG: amt:Amet_0721 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.699
Toce_0631
KEGG: tte:TTE0927 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.602
Toce_1540
Anti-anti-sigma factor; InterPro IPR003658:IPR002645; KEGG: mta:Moth_0393 anti-sigma-factor antagonist domain-containing protein; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; SPTR: Anti-sigma-factor antagonist (STAS) domain protein; TIGRFAM: anti-anti-sigma factor; PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor.
  
     0.535
Toce_1924
InterPro IPR012902; KEGG: dau:Daud_0973 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; general secretion pathway protein J.
  
     0.519
Toce_1333
InterPro IPR012902; KEGG: dae:Dtox_2705 hypothetical protein; SPTR: N-terminal methylation protein; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
  
     0.498
Toce_0202
InterPro IPR004518; KEGG: tpd:Teth39_0442 MazG nucleotide pyrophosphohydrolase; PFAM: MazG nucleotide pyrophosphohydrolase; SPTR: MazG nucleotide pyrophosphohydrolase; PFAM: MazG nucleotide pyrophosphohydrolase domain.
  
     0.479
Toce_0288
Methicillin resistance protein; COGs: COG2348 Uncharacterized protein involved in methicillin resistance; InterPro IPR003447; KEGG: mta:Moth_2408 methicillin resistance protein; PFAM: Methicillin resistance protein; SPTR: Methicillin resistance protein; PFAM: FemAB family.
  
     0.463
Your Current Organism:
Thermosediminibacter oceani
NCBI taxonomy Id: 555079
Other names: T. oceani DSM 16646, Thermosediminibacter oceani DSM 16646, Thermosediminibacter oceani JW/IW-1228P, Thermosediminibacter oceani str. DSM 16646, Thermosediminibacter oceani strain DSM 16646
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