STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Gene Fusion
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[Homology]
Score
Toce_0559ATP/cobalamin adenosyltransferase; COGs: COG2096 conserved hypothetical protein; InterPro IPR017858:IPR009221:IPR002779:IPR005624; KEGG: tex:Teth514_1943 ATP--cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; protein of unknown function DUF336; PRIAM: Cob(I)yrinic acid a,c-diamide adenosyltransferase; SPTR: ATP--cobalamin adenosyltransferase; TIGRFAM: ATP/cobalamin adenosyltransferase; PFAM: Domain of unknown function (DUF336); Cobalamin adenosyltransferase; TIGRFAM: ATP:cob(I)alamin adenosyltransferase. (331 aa)    
Predicted Functional Partners:
Toce_0550
Dehydratase medium subunit; InterPro IPR003208; KEGG: tex:Teth514_1952 dehydratase, medium subunit; PFAM: dehydratase medium subunit; SPTR: Dehydratase, medium subunit; PFAM: Dehydratase medium subunit.
 
  
 0.954
Toce_0560
COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR012408:IPR015590; KEGG: tex:Teth514_1942 aldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; SPTR: Aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase family.
 
  
 0.947
Toce_0549
COGs: COG4909 Propanediol dehydratase large subunit; InterPro IPR003206; KEGG: tex:Teth514_1953 glycerol dehydratase; PFAM: dehydratase large subunit; PRIAM: Glycerol dehydratase; SPTR: Glycerol dehydratase; PFAM: Dehydratase large subunit.
 
  
 0.946
Toce_0551
COGs: COG4910 Propanediol dehydratase small subunit; InterPro IPR003207; KEGG: tex:Teth514_1951 dehydratase, small subunit; PFAM: dehydratase small subunit; SPTR: Dehydratase, small subunit; PFAM: Dehydratase small subunit.
 
  
 0.945
Toce_0548
COGs: COG4816 Ethanolamine utilization protein; InterPro IPR009193:IPR000249; KEGG: tex:Teth514_1954 microcompartments protein; PFAM: microcompartments protein; SPTR: Microcompartments protein; PFAM: BMC domain.
 
  
 0.934
Toce_0552
InterPro IPR009191; KEGG: tex:Teth514_1950 hypothetical protein; PFAM: Diol/glycerol dehydratase reactivating factor large subunit; SPTR: Putative uncharacterized protein; PFAM: Diol dehydratase reactivase ATPase-like domain.
 
  
 0.916
Toce_0558
Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; COGs: COG4576 Carbon dioxide concentrating mechanism/carboxysome shell protein; InterPro IPR004992; KEGG: tex:Teth514_1944 ethanolamine utilization protein EutN/carboxysome structural protein CcmL; PFAM: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; SPTR: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; PFAM: Ethanolamine utilisation protein EutN/carboxysome.
     
 0.910
Toce_0553
KEGG: tex:Teth514_1949 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Dehydratase medium subunit.
 
   
 0.907
Toce_0555
Propanediol utilization protein; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate.
  
  
 0.901
Toce_0561
Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; COGs: COG4656 NADH:ubiquinone oxidoreductase subunit RnfC; InterProIPR017896:IPR017900:IPR017054:IPR011538:IPR 019554; KEGG: cbt:CLH_1845 ethanolamine utilization Fe-S center protein eut; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; SPTR: Ethanolamine utilization Fe-S center protein eut; PFAM: Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain.
  
 
 0.898
Your Current Organism:
Thermosediminibacter oceani
NCBI taxonomy Id: 555079
Other names: T. oceani DSM 16646, Thermosediminibacter oceani DSM 16646, Thermosediminibacter oceani JW/IW-1228P, Thermosediminibacter oceani str. DSM 16646, Thermosediminibacter oceani strain DSM 16646
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