Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Toce_0616NLP/P60 protein; COGs: COG0791 Cell wall-associated hydrolase (invasion-associated protein); InterPro IPR000064; KEGG: tle:Tlet_0253 NLP/P60 protein; PFAM: NLP/P60 protein; SPTR: NLP/P60 protein; PFAM: NlpC/P60 family; Bacterial SH3 domain. (383 aa)    
Predicted Functional Partners:
Toce_1690
Protein of unknown function DUF214; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
 
 0.806
Toce_0617
Oligopeptide/dipeptide ABC transporter, ATPase subunit; COGs: COG0444 ABC-type dipeptide/oligopeptide/nickel transport system ATPase component; InterPro IPR003439:IPR010066:IPR003593:IPR013563; KEGG: sth:STH2824 oligopeptide ABC transporter ATP-binding protein; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; SPTR: Oligopeptide ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipe [...]
  
    0.738
Toce_0618
Oligopeptide/dipeptide ABC transporter, ATPase subunit; COGs: COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase; InterProIPR003439:IPR017871:IPR010066:IPR003593:IPR 013563; KEGG: sth:STH2823 oligopeptide ABC transporter ATP-binding protein; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; SPTR: Oligopeptide ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM [...]
       0.732
Toce_1277
KEGG: tte:TTE1306 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3186).
   
 
 0.732
Toce_0615
COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: sth:STH130 oligopeptide ABC transporter permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Oligopeptide ABC transporter permease protein; PFAM: Binding-protein-dependent transport system inner membrane component.
  
    0.714
Toce_0614
COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: sth:STH129 oligopeptide ABC transporter permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Oligopeptide ABC transporter permease protein; PFAM: Binding-protein-dependent transport system inner membrane component.
  
    0.692
ftsE
Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
  
 
 0.561
Toce_0613
Extracellular solute-binding protein family 5; COGs: COG0747 ABC-type dipeptide transport system periplasmic component; InterPro IPR000914; KEGG: sth:STH128 oligopeptide ABC transporter substrate-binding protein; PFAM: extracellular solute-binding protein family 5; SPTR: Oligopeptide ABC transporter substrate-binding protein; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle.
       0.535
Toce_1578
Flagellar protein FliS; COGs: COG1516 Flagellin-specific chaperone FliS; InterPro IPR003713; KEGG: amt:Amet_0786 flagellar protein FliS; PFAM: flagellar protein FliS; SPTR: Flagellar protein FliS; TIGRFAM: flagellar protein FliS; PFAM: Flagellar protein FliS; TIGRFAM: flagellar biosynthetic protein FliS.
  
    0.534
Toce_1588
COGs: COG0438 Glycosyltransferase; InterProIPR001296:IPR013216:IPR001173:IPR019734:IPR 013026:IPR000276; KEGG: tnp:Tnap_0554 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; Methyltransferase type 11; glycosyl transferase group 1; SMART: Tetratricopeptide repeat; SPTR: Glycosyl transferase family 2; PFAM: Methyltransferase domain; Glycosyl transferases group 1; Glycosyl transferase family 2.
  
 
 0.518
Your Current Organism:
Thermosediminibacter oceani
NCBI taxonomy Id: 555079
Other names: T. oceani DSM 16646, Thermosediminibacter oceani DSM 16646, Thermosediminibacter oceani JW/IW-1228P, Thermosediminibacter oceani str. DSM 16646, Thermosediminibacter oceani strain DSM 16646
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.