Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Toce_0631KEGG: tte:TTE0927 hypothetical protein; SPTR: Putative uncharacterized protein. (362 aa)    
Predicted Functional Partners:
Toce_0197
S-layer domain protein; InterPro IPR001119; KEGG: tit:Thit_0105 S-layer domain protein; PFAM: S-layer domain protein; SPTR: S-layer domain protein; PFAM: S-layer homology domain.
 
  
 0.777
Toce_1277
KEGG: tte:TTE1306 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3186).
  
 
 0.776
Toce_2233
YycH family protein; COGs: COG4863 conserved hypothetical protein; InterPro IPR009996; KEGG: amt:Amet_4755 hypothetical protein; PFAM: YycH family protein; SPTR: Putative uncharacterized protein; PFAM: YycH protein.
  
     0.762
Toce_0475
InterPro IPR002502; KEGG: dau:Daud_1669 N-acetylmuramoyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: N-acetylmuramoyl-L-alanine amidase family 2; SPTR: N-acetylmuramoyl-L-alanine amidase, family 2; PFAM: N-acetylmuramoyl-L-alanine amidase.
  
  
 0.739
Toce_2232
InterPro IPR018604; KEGG: tit:Thit_2308 protein of unknown function YycH; PFAM: Protein of unknown function YycH; SPTR: Putative uncharacterized protein; PFAM: YycH protein.
  
     0.710
Toce_1880
Copper amine oxidase domain protein; COGs: COG4632 Exopolysaccharide biosynthesis protein related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase; InterPro IPR012854; KEGG: tit:Thit_0459 hypothetical protein; PFAM: copper amine oxidase domain protein; SPTR: Putative uncharacterized protein; PFAM: Copper amine oxidase N-terminal domain; Predicted periplasmic protein (DUF2233).
  
     0.675
Toce_1762
UspA domain protein; COGs: COG2205 Osmosensitive K+ channel histidine kinase; InterPro IPR006016; KEGG: tpd:Teth39_0454 osmosensitive K+ channel histidine kinase-like protein; PFAM: UspA domain protein; SPTR: UspA domain protein; PFAM: Universal stress protein family.
  
     0.630
Toce_1483
KEGG: hor:Hore_09920 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.622
Toce_0192
COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; KEGG: mta:Moth_1831 glycosyltransferase; SPTR: Glycosyltransferase.
  
     0.606
Toce_0239
Copper amine oxidase domain protein; COGs: COG3858 glycosyl hydrolase; InterPro IPR012854:IPR001223:IPR011583:IPR001579; KEGG: swo:Swol_1871 glycosyl hydrolase-like protein; PFAM: copper amine oxidase domain protein; glycoside hydrolase family 18; SMART: chitinase II; SPTR: Copper amine oxidase domain protein; PFAM: Copper amine oxidase N-terminal domain; Glycosyl hydrolases family 18; Belongs to the glycosyl hydrolase 18 family.
  
     0.604
Your Current Organism:
Thermosediminibacter oceani
NCBI taxonomy Id: 555079
Other names: T. oceani DSM 16646, Thermosediminibacter oceani DSM 16646, Thermosediminibacter oceani JW/IW-1228P, Thermosediminibacter oceani str. DSM 16646, Thermosediminibacter oceani strain DSM 16646
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.