Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Score
Toce_0669Protein of unknown function UPF0047; COGs: COG0432 conserved hypothetical protein; InterPro IPR001602; KEGG: trq:TRQ2_0947 hypothetical protein; PFAM: protein of unknown function UPF0047; SPTR: Putative uncharacterized protein; PFAM: Uncharacterised protein family UPF0047; TIGRFAM: conserved hypothetical protein TIGR00149. (136 aa)    
Predicted Functional Partners:
Toce_1055
Enoyl-(acyl-carrier-protein) reductase II; COGs: COG2070 Dioxygenase related to 2-nitropropane dioxygenase; InterPro IPR004136:IPR017569; KEGG: tex:Teth514_1725 2-nitropropane dioxygenase, NPD; PFAM: 2-nitropropane dioxygenase NPD; SPTR: 2-nitropropane dioxygenase, NPD; TIGRFAM: enoyl-(acyl-carrier-protein) reductase II; PFAM: 2-nitropropane dioxygenase; TIGRFAM: putative enoyl-(acyl-carrier-protein) reductase II.
      0.573
Toce_0670
KEGG: ptm:GSPATT00004091001 hypothetical protein; SPTR: Chromosome undetermined scaffold_9, whole genome shotgun sequence.
       0.561
Toce_0668
KEGG: hor:Hore_03980 putative transmembrane anti-sigma factor; SPTR: Putative transmembrane anti-sigma factor.
       0.506
Your Current Organism:
Thermosediminibacter oceani
NCBI taxonomy Id: 555079
Other names: T. oceani DSM 16646, Thermosediminibacter oceani DSM 16646, Thermosediminibacter oceani JW/IW-1228P, Thermosediminibacter oceani str. DSM 16646, Thermosediminibacter oceani strain DSM 16646
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