STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Toce_0676Abortive infection protein; InterPro IPR003675; KEGG: tfu:Tfu_1444 hypothetical protein; PFAM: Abortive infection protein; SPTR: Putative uncharacterized protein; PFAM: CAAX amino terminal protease family. (169 aa)    
Predicted Functional Partners:
Toce_0677
Hypothetical protein.
       0.773
Toce_1879
Protein of unknown function DUF1624; COGs: COG3503 membrane protein; InterPro IPR012429; KEGG: dae:Dtox_2070 protein of unknown function DUF1624; PFAM: protein of unknown function DUF1624; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1624).
  
    0.697
Toce_1515
COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: tex:Teth514_0144 nitroreductase; PFAM: nitroreductase; SPTR: Nitroreductase; PFAM: Nitroreductase family.
  
  
 0.547
Toce_1641
COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: tte:TTE1807 nitroreductase; PFAM: nitroreductase; SPTR: Nitroreductase; PFAM: Nitroreductase family.
  
  
 0.547
Toce_0675
Hypothetical protein; KEGG: cbc:CbuK_0596 NADH-quinone oxidoreductase chain K; SPTR: NADH dehydrogenase (Ubiquinone), K subunit.
       0.444
Toce_0678
KEGG: kol:Kole_1187 major facilitator superfamily MFS_1; SPTR: Major facilitator superfamily MFS_1; manually curated.
       0.432
Toce_1588
COGs: COG0438 Glycosyltransferase; InterProIPR001296:IPR013216:IPR001173:IPR019734:IPR 013026:IPR000276; KEGG: tnp:Tnap_0554 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; Methyltransferase type 11; glycosyl transferase group 1; SMART: Tetratricopeptide repeat; SPTR: Glycosyl transferase family 2; PFAM: Methyltransferase domain; Glycosyl transferases group 1; Glycosyl transferase family 2.
  
  
 0.412
Your Current Organism:
Thermosediminibacter oceani
NCBI taxonomy Id: 555079
Other names: T. oceani DSM 16646, Thermosediminibacter oceani DSM 16646, Thermosediminibacter oceani JW/IW-1228P, Thermosediminibacter oceani str. DSM 16646, Thermosediminibacter oceani strain DSM 16646
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