Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Toce_0728KEGG: pth:PTH_0184 hypothetical protein; SPTR: Putative uncharacterized protein. (58 aa)    
Predicted Functional Partners:
Toce_0727
Conserved hypothetical protein; InterPro IPR016571; KEGG: tpd:Teth39_0700 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.697
Toce_0726
COGs: COG3546 Mn-containing catalase; InterPro IPR007760; KEGG: hmo:HM1_1323 manganese-containing, non-heme catalase; PFAM: manganese containing catalase; SPTR: Manganese-containing, non-heme catalase; PFAM: Manganese containing catalase.
       0.657
Toce_0729
Hypothetical protein; KEGG: dvi:Dvir_GJ19935 GJ19935 gene product from transcript GJ19935-RA; SPTR: GJ19935.
       0.497
Your Current Organism:
Thermosediminibacter oceani
NCBI taxonomy Id: 555079
Other names: T. oceani DSM 16646, Thermosediminibacter oceani DSM 16646, Thermosediminibacter oceani JW/IW-1228P, Thermosediminibacter oceani str. DSM 16646, Thermosediminibacter oceani strain DSM 16646
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.