STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Toce_0860KEGG: sth:STH1710 hypothetical protein; SPTR: UPF0342 protein STH1710; PFAM: Protein of unknown function (DUF964); Belongs to the UPF0342 family. (111 aa)    
Predicted Functional Partners:
Toce_0859
COGs: COG1092 SAM-dependent methyltransferase; InterPro IPR002478:IPR002905; KEGG: cpi:Cpin_6903 putative RNA methylase; PFAM: N2N2-dimethylguanosine tRNA methyltransferase; PUA domain containing protein; SMART: PUA domain containing protein; SPTR: Putative uncharacterized protein; PFAM: PUA domain; S-adenosylmethionine-dependent methyltransferase.
     
 0.810
Toce_0861
Haloacid dehalogenase domain protein hydrolase; COGs: COG1011 hydrolase (HAD superfamily); InterPro IPR005834; KEGG: dau:Daud_0172 hydrolase; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: Haloacid dehalogenase domain protein hydrolase; PFAM: haloacid dehalogenase-like hydrolase.
 
     0.809
Toce_0862
COGs: COG1387 Histidinol phosphatase and related hydrolase of the PHP family; InterPro IPR003141:IPR010140:IPR004013; KEGG: tte:TTE1835 PHP family histidinol phosphatase/hydrolase; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; SPTR: Histidinol phosphatase and related hydrolases of the PHP family; TIGRFAM: histidinol phosphate phosphatase HisJ family; PFAM: PHP domain; TIGRFAM: histidinol phosphate phosphatase HisJ family.
       0.525
Toce_0863
Conserved hypothetical protein; Displays ATPase and GTPase activities.
       0.525
Toce_0864
Protein of unknown function UPF0052 and CofD; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.
       0.525
Toce_1273
PHP domain protein; COGs: COG1379 conserved hypothetical protein; InterPro IPR004013; KEGG: tte:TTE1311 hypothetical protein; PFAM: PHP domain protein; SPTR: Putative uncharacterized protein; TIGRFAM: conserved hypothetical protein TIGR00375.
  
     0.495
whiA
Protein of unknown function DUF199; Involved in cell division and chromosome segregation.
       0.450
Toce_0866
COGs: COG1925 Phosphotransferase system HPr-related protein; InterPro IPR000032:IPR005698:IPR001020:IPR002114; KEGG: tte:TTE1820 phosphotransferase system, HPr-related proteins; PFAM: phosphoryl transfer system HPr; SPTR: Phosphotransferase system, HPr-related proteins; TIGRFAM: phosphocarrier, HPr family; PFAM: PTS HPr component phosphorylation site; TIGRFAM: Phosphotransferase System HPr (HPr) Family.
       0.450
Toce_0867
Putative signal transduction protein with CBS and DRTGG domains; COGs: COG4109 transcriptional regulator protein containing CBS domains; InterPro IPR000644:IPR010766; KEGG: gwc:GWCH70_2695 putative signal transduction protein with CBS and DRTGG domains; PFAM: DRTGG domain protein; CBS domain containing protein; SMART: CBS domain containing protein; SPTR: Putative signal transduction protein with CBS and DRTGG domains; PFAM: DRTGG domain; CBS domain; Bacterial regulatory proteins, gntR family.
       0.426
Your Current Organism:
Thermosediminibacter oceani
NCBI taxonomy Id: 555079
Other names: T. oceani DSM 16646, Thermosediminibacter oceani DSM 16646, Thermosediminibacter oceani JW/IW-1228P, Thermosediminibacter oceani str. DSM 16646, Thermosediminibacter oceani strain DSM 16646
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.