Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Toce_0899Membrane protein of unknown function; InterPro IPR007165; KEGG: mta:Moth_0580 hypothetical protein; PFAM: membrane protein of unknown function; SPTR: Putative uncharacterized protein; PFAM: Membrane protein of unknown function. (108 aa)    
Predicted Functional Partners:
Toce_1012
KEGG: swo:Swol_0963 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.766
gpr
Spore protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
 
     0.725
Toce_2198
InterPro IPR018126; KEGG: tit:Thit_2217 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Small, acid-soluble spore proteins, alpha/beta type.
  
     0.683
Toce_2237
InterPro IPR020390; KEGG: drm:Dred_1679 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2619).
  
     0.680
Toce_1219
Vesicle-fusing ATPase; COGs: COG0465 ATP-dependent Zn protease; InterPro IPR003593:IPR003959:IPR000642:IPR003960; KEGG: hor:Hore_11930 microtubule-severing ATPase; PFAM: AAA ATPase central domain protein; peptidase M41; PRIAM: Vesicle-fusing ATPase; SMART: AAA ATPase; SPTR: Microtubule-severing ATPase; PFAM: Peptidase family M41; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent metalloprotease FtsH; Belongs to the AAA ATPase family.
  
    0.639
Toce_1765
COGs: COG1067 ATP-dependent protease; InterProIPR014251:IPR003959:IPR001984:IPR003593:IPR 008268; KEGG: drm:Dred_2560 ATPase central domain-containing protein; PFAM: AAA ATPase central domain protein; PRIAM: Endopeptidase La; SMART: AAA ATPase; SPTR: Endopeptidase La; TIGRFAM: ATP-dependent protease LonB; PFAM: ATPase family associated with various cellular activities (AAA); Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: ATP-dependent protease LonB; lon-related putative ATP-dependent protease.
  
     0.632
rpsT
SSU ribosomal protein S20P; Binds directly to 16S ribosomal RNA.
       0.624
Toce_1313
Protein of unknown function DUF322; InterPro IPR005531; KEGG: mta:Moth_1522 hypothetical protein; PFAM: protein of unknown function DUF322; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF322).
  
     0.592
Toce_0976
KEGG: tit:Thit_1458 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3189).
 
     0.574
Toce_0971
Protein of unknown function DUF1614; InterPro IPR011672; KEGG: tpd:Teth39_0832 hypothetical protein; PFAM: protein of unknown function DUF1614; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1614).
  
     0.565
Your Current Organism:
Thermosediminibacter oceani
NCBI taxonomy Id: 555079
Other names: T. oceani DSM 16646, Thermosediminibacter oceani DSM 16646, Thermosediminibacter oceani JW/IW-1228P, Thermosediminibacter oceani str. DSM 16646, Thermosediminibacter oceani strain DSM 16646
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